Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZO5 entry

There are 2 chains in PDB entry 3ZO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 366LEU 595
B
 ASP 16LEU 96
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3ZO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
369 381Right-handed alpha
Helix 2
2
A
405 409Right-handed alpha
Helix 3
3
A
410 412Right-handed 310
Helix 4
4
A
418 437Right-handed alpha
Helix 5
5
A
447 461Right-handed alpha
Helix 6
6
A
462 465Right-handed 310
Helix 7
7
A
468 472Right-handed 310
Helix 8
8
A
507 527Right-handed alpha
Helix 9
9
A
553 567Right-handed alpha
Helix 10
10
A
574 576Right-handed 310
Helix 11
11
A
577 592Right-handed alpha
Helix 12
12
B
39 52Right-handed alpha
Helix 13
13
B
54 56Right-handed 310
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There are 3 sheets in PDB entry 3ZO5. Click on sheet of interest to get list of strands forming it: AA, AB, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 392first strand
Strand 2
A
401 404anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 443first strand
Strand 2
A
474 480parallel
Strand 3
A
485 491anti-parallel
Strand 4
A
496 500anti-parallel
Strand 5
A
536 539parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 35first strand
Strand 2
B
17 23anti-parallel
Strand 3
B
82 88parallel
Strand 4
B
58 62anti-parallel
Strand 5
B
65 66anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il