Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZO9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZO9 entry

There are 2 chains in PDB entry 3ZO9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 29ASP 586
B
 HIS 17PRO 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 3ZO9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 39Right-handed alpha
Helix 2
2
A
45 50Right-handed alpha
Helix 3
3
A
59 66Right-handed alpha
Helix 4
4
A
66 74Right-handed alpha
Helix 5
5
A
103 106Right-handed 310
Helix 6
6
A
107 121Right-handed alpha
Helix 7
7
A
138 147Right-handed alpha
Helix 8
8
A
205 223Right-handed alpha
Helix 9
9
A
232 235Right-handed 310
Helix 10
10
A
246 264Right-handed alpha
Helix 11
11
A
276 281Right-handed alpha
Helix 12
12
A
282 285Right-handed 310
Helix 13
13
A
286 290Right-handed 310
Helix 14
14
A
301 313Right-handed alpha
Helix 15
15
A
315 324Right-handed alpha
Helix 16
16
A
360 363Right-handed 310
Helix 17
17
A
364 370Right-handed alpha
Helix 18
18
A
376 381Right-handed alpha
Helix 19
19
A
384 398Right-handed alpha
Helix 20
20
A
415 419Right-handed 310
Helix 21
21
A
421 425Right-handed 310
Helix 22
22
A
433 438Right-handed 310
Helix 23
23
A
442 446Right-handed 310
Helix 24
24
A
462 468Right-handed alpha
Helix 25
25
A
472 486Right-handed alpha
Helix 26
26
A
487 493Right-handed alpha
Helix 27
27
A
543 547Right-handed 310
Helix 28
28
B
19 23Right-handed 310
Helix 29
29
B
34 39Right-handed alpha
Helix 30
30
B
45 50Right-handed alpha
Helix 31
31
B
59 66Right-handed alpha
Helix 32
32
B
66 74Right-handed alpha
Helix 33
33
B
103 106Right-handed 310
Helix 34
34
B
107 121Right-handed alpha
Helix 35
35
B
138 147Right-handed alpha
Helix 36
36
B
205 223Right-handed alpha
Helix 37
37
B
232 235Right-handed 310
Helix 38
38
B
246 264Right-handed alpha
Helix 39
39
B
276 281Right-handed alpha
Helix 40
40
B
282 285Right-handed 310
Helix 41
41
B
286 290Right-handed 310
Helix 42
42
B
301 313Right-handed alpha
Helix 43
43
B
315 325Right-handed alpha
Helix 44
44
B
360 363Right-handed 310
Helix 45
45
B
364 370Right-handed alpha
Helix 46
46
B
376 381Right-handed alpha
Helix 47
47
B
384 398Right-handed alpha
Helix 48
48
B
407 411Right-handed 310
Helix 49
49
B
415 419Right-handed 310
Helix 50
50
B
421 425Right-handed 310
Helix 51
51
B
433 438Right-handed 310
Helix 52
52
B
442 446Right-handed 310
Helix 53
53
B
462 468Right-handed alpha
Helix 54
54
B
472 486Right-handed alpha
Helix 55
55
B
487 493Right-handed alpha
Helix 56
56
B
520 524Right-handed 310
Helix 57
57
B
543 547Right-handed 310
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There are 10 sheets in PDB entry 3ZO9. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
77 80parallel
Strand 3
A
124 130parallel
Strand 4
A
226 230parallel
Strand 5
A
268 272parallel
Strand 6
A
296 298parallel
Strand 7
A
333 336parallel
Strand 8
A
401 405parallel
Strand 9
A
41 43parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
97 101anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
189 191anti-parallel
Strand 3
A
180 182anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 497first strand
Strand 2
A
505 512anti-parallel
Strand 3
A
524 531anti-parallel
Strand 4
A
577 583anti-parallel
Strand 5
A
550 553anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 541first strand
Strand 2
A
568 572anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 43first strand
Strand 2
B
77 80parallel
Strand 3
B
124 130parallel
Strand 4
B
226 230parallel
Strand 5
B
268 272parallel
Strand 6
B
296 298parallel
Strand 7
B
333 337parallel
Strand 8
B
401 405parallel
Strand 9
B
41 43parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 85first strand
Strand 2
B
97 101anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
189 191anti-parallel
Strand 3
B
180 182anti-parallel
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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
496 497first strand
Strand 2
B
505 510anti-parallel
Strand 3
B
525 531anti-parallel
Strand 4
B
577 583anti-parallel
Strand 5
B
550 553anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
537 541first strand
Strand 2
B
568 572anti-parallel
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