Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZOG entry

There is 1 chain in PDB entry 3ZOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -7GLU 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3ZOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 8Right-handed 310
Helix 2
2
A
19 23Right-handed 310
Helix 3
3
A
49 59Right-handed alpha
Helix 4
4
A
70 78Right-handed alpha
Helix 5
5
A
82 89Right-handed 310
Helix 6
6
A
138 145Right-handed 310
Helix 7
7
A
147 151Right-handed 310
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There are 3 sheets in PDB entry 3ZOG. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
154 157anti-parallel
Strand 3
A
160 162anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
13 17anti-parallel
Strand 3
A
60 65anti-parallel
Strand 4
A
109 121anti-parallel
Strand 5
A
124 136anti-parallel
Strand 6
A
40 45anti-parallel
Strand 7
A
31 35anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
103 104anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il