Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZPC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZPC entry

There are 2 chains in PDB entry 3ZPC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLN 358
B
 GLU 3GLN 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3ZPC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 18Right-handed alpha
Helix 2
2
A
54 64Right-handed alpha
Helix 3
3
A
65 68Right-handed 310
Helix 4
4
A
87 96Right-handed alpha
Helix 5
5
A
113 122Right-handed alpha
Helix 6
6
A
131 137Right-handed alpha
Helix 7
7
A
139 149Right-handed alpha
Helix 8
8
A
177 190Right-handed alpha
Helix 9
9
A
198 205Right-handed alpha
Helix 10
10
A
217 221Right-handed 310
Helix 11
11
A
239 243Right-handed 310
Helix 12
12
A
244 246Right-handed 310
Helix 13
13
A
255 262Right-handed alpha
Helix 14
14
A
270 283Right-handed alpha
Helix 15
15
A
292 302Right-handed alpha
Helix 16
16
A
331 335Right-handed 310
Helix 17
17
B
3 19Right-handed alpha
Helix 18
18
B
20 22Right-handed 310
Helix 19
19
B
54 64Right-handed alpha
Helix 20
20
B
65 68Right-handed 310
Helix 21
21
B
87 95Right-handed alpha
Helix 22
22
B
113 122Right-handed alpha
Helix 23
23
B
131 137Right-handed alpha
Helix 24
24
B
139 149Right-handed alpha
Helix 25
25
B
177 190Right-handed alpha
Helix 26
26
B
198 205Right-handed alpha
Helix 27
27
B
217 221Right-handed 310
Helix 28
28
B
239 244Right-handed 310
Helix 29
29
B
244 246Right-handed 310
Helix 30
30
B
255 262Right-handed alpha
Helix 31
31
B
270 283Right-handed alpha
Helix 32
32
B
292 302Right-handed alpha
Helix 33
33
B
331 335Right-handed 310
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There are 6 sheets in PDB entry 3ZPC. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
32 37anti-parallel
Strand 3
A
71 76anti-parallel
Strand 4
A
99 104parallel
Strand 5
A
125 128parallel
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There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
A
248 251parallel
Strand 3
A
225 229parallel
Strand 4
A
193 197parallel
Strand 5
A
286 289parallel
Strand 6
A
152 160parallel
Strand 7
A
307 313parallel
Strand 8
A
349 356anti-parallel
Strand 9
A
336 346anti-parallel
Strand 10
B
315 316anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 166first strand
Strand 2
A
322 323anti-parallel
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There are 10 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 316first strand
Strand 2
B
336 346anti-parallel
Strand 3
B
349 356anti-parallel
Strand 4
B
307 313anti-parallel
Strand 5
B
152 160parallel
Strand 6
B
286 290parallel
Strand 7
B
193 197parallel
Strand 8
B
225 229parallel
Strand 9
B
248 251parallel
Strand 10
B
264 266parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 46first strand
Strand 2
B
32 36anti-parallel
Strand 3
B
71 76anti-parallel
Strand 4
B
99 104parallel
Strand 5
B
125 128parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 166first strand
Strand 2
B
322 323anti-parallel
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