Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZPG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZPG entry

There is 1 chain in PDB entry 3ZPG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2THR 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3ZPG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 19Right-handed alpha
Helix 2
2
A
20 22Right-handed 310
Helix 3
3
A
54 64Right-handed alpha
Helix 4
4
A
65 68Right-handed 310
Helix 5
5
A
87 95Right-handed alpha
Helix 6
6
A
113 122Right-handed alpha
Helix 7
7
A
131 137Right-handed alpha
Helix 8
8
A
139 149Right-handed alpha
Helix 9
9
A
177 190Right-handed alpha
Helix 10
10
A
198 205Right-handed alpha
Helix 11
11
A
217 221Right-handed 310
Helix 12
12
A
239 243Right-handed 310
Helix 13
13
A
244 246Right-handed 310
Helix 14
14
A
255 261Right-handed alpha
Helix 15
15
A
270 283Right-handed alpha
Helix 16
16
A
292 302Right-handed alpha
Helix 17
17
A
331 335Right-handed 310
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There are 2 sheets in PDB entry 3ZPG. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
32 37anti-parallel
Strand 3
A
71 76anti-parallel
Strand 4
A
99 104parallel
Strand 5
A
125 128parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
A
248 251parallel
Strand 3
A
225 229parallel
Strand 4
A
193 197parallel
Strand 5
A
286 290parallel
Strand 6
A
152 160parallel
Strand 7
A
307 313parallel
Strand 8
A
349 356anti-parallel
Strand 9
A
338 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il