Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZPH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZPH entry

There are 5 chains in PDB entry 3ZPH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ARG 282
B
 ALA 1ARG 282
C
 ALA 1ARG 282
D
 ALA 1ARG 282
E
 ALA 1LEU 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3ZPH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 32Right-handed alpha
Helix 2
2
A
32 42Right-handed alpha
Helix 3
3
A
59 64Right-handed 310
Helix 4
4
A
81 86Right-handed 310
Helix 5
5
A
95 101Right-handed alpha
Helix 6
6
A
155 158Right-handed 310
Helix 7
7
A
174 185Right-handed alpha
Helix 8
8
A
186 193Right-handed alpha
Helix 9
9
A
223 232Right-handed alpha
Helix 10
10
A
233 238Right-handed 310
Helix 11
11
A
271 275Right-handed alpha
Helix 12
12
B
18 20Right-handed 310
Helix 13
13
B
21 32Right-handed alpha
Helix 14
14
B
32 42Right-handed alpha
Helix 15
15
B
59 64Right-handed 310
Helix 16
16
B
81 86Right-handed 310
Helix 17
17
B
95 101Right-handed alpha
Helix 18
18
B
119 125Right-handed alpha
Helix 19
19
B
155 158Right-handed 310
Helix 20
20
B
174 186Right-handed alpha
Helix 21
21
B
186 193Right-handed alpha
Helix 22
22
B
223 232Right-handed alpha
Helix 23
23
B
233 238Right-handed 310
Helix 24
24
B
271 275Right-handed alpha
Helix 25
25
C
21 32Right-handed alpha
Helix 26
26
C
32 42Right-handed alpha
Helix 27
27
C
59 64Right-handed 310
Helix 28
28
C
81 86Right-handed 310
Helix 29
29
C
95 101Right-handed alpha
Helix 30
30
C
155 158Right-handed 310
Helix 31
31
C
174 185Right-handed alpha
Helix 32
32
C
185 193Right-handed alpha
Helix 33
33
C
223 232Right-handed alpha
Helix 34
34
C
233 238Right-handed 310
Helix 35
35
C
271 275Right-handed alpha
Helix 36
36
D
18 20Right-handed 310
Helix 37
37
D
21 32Right-handed alpha
Helix 38
38
D
32 42Right-handed alpha
Helix 39
39
D
59 64Right-handed 310
Helix 40
40
D
81 86Right-handed 310
Helix 41
41
D
94 101Right-handed alpha
Helix 42
42
D
155 158Right-handed 310
Helix 43
43
D
174 185Right-handed alpha
Helix 44
44
D
185 193Right-handed alpha
Helix 45
45
D
223 232Right-handed alpha
Helix 46
46
D
233 238Right-handed 310
Helix 47
47
D
271 275Right-handed alpha
Helix 48
48
E
18 20Right-handed 310
Helix 49
49
E
21 32Right-handed alpha
Helix 50
50
E
32 42Right-handed alpha
Helix 51
51
E
59 64Right-handed 310
Helix 52
52
E
81 86Right-handed 310
Helix 53
53
E
95 101Right-handed alpha
Helix 54
54
E
155 158Right-handed 310
Helix 55
55
E
174 186Right-handed alpha
Helix 56
56
E
186 193Right-handed alpha
Helix 57
57
E
223 232Right-handed alpha
Helix 58
58
E
233 238Right-handed 310
Helix 59
59
E
271 275Right-handed alpha
Helix 60
60
F
18 20Right-handed 310
Helix 61
61
F
21 32Right-handed alpha
Helix 62
62
F
32 42Right-handed alpha
Helix 63
63
F
59 64Right-handed 310
Helix 64
64
F
81 86Right-handed 310
Helix 65
65
F
94 102Right-handed alpha
Helix 66
66
F
155 158Right-handed 310
Helix 67
67
F
174 186Right-handed alpha
Helix 68
68
F
186 193Right-handed alpha
Helix 69
69
F
205 210Right-handed alpha
Helix 70
70
F
223 232Right-handed alpha
Helix 71
71
F
232 237Right-handed alpha
Helix 72
72
F
270 275Right-handed alpha
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There are 12 sheets in PDB entry 3ZPH. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, EA, EB, FA, FB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
8 14anti-parallel
Strand 3
A
69 75anti-parallel
Strand 4
A
45 52anti-parallel
Strand 5
A
269 270anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 149first strand
Strand 2
A
196 203anti-parallel
Strand 3
A
215 221anti-parallel
Strand 4
A
161 167anti-parallel
Strand 5
A
258 263anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 141first strand
Strand 2
B
8 14anti-parallel
Strand 3
B
69 75anti-parallel
Strand 4
B
45 52anti-parallel
Strand 5
B
269 270anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 149first strand
Strand 2
B
198 203anti-parallel
Strand 3
B
215 221anti-parallel
Strand 4
B
161 167anti-parallel
Strand 5
B
258 263anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
137 140first strand
Strand 2
C
8 14anti-parallel
Strand 3
C
69 75anti-parallel
Strand 4
C
45 52anti-parallel
Strand 5
C
269 270anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 149first strand
Strand 2
C
196 203anti-parallel
Strand 3
C
215 221anti-parallel
Strand 4
C
161 167anti-parallel
Strand 5
C
258 263anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
137 141first strand
Strand 2
D
8 14anti-parallel
Strand 3
D
69 75anti-parallel
Strand 4
D
45 52anti-parallel
Strand 5
D
269 270anti-parallel
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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
146 149first strand
Strand 2
D
196 203anti-parallel
Strand 3
D
215 221anti-parallel
Strand 4
D
161 167anti-parallel
Strand 5
D
258 263anti-parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
137 140first strand
Strand 2
E
8 14anti-parallel
Strand 3
E
69 75anti-parallel
Strand 4
E
45 52anti-parallel
Strand 5
E
269 270anti-parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
146 149first strand
Strand 2
E
198 203anti-parallel
Strand 3
E
215 221anti-parallel
Strand 4
E
161 167anti-parallel
Strand 5
E
258 263anti-parallel
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There are 4 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
45 52first strand
Strand 2
F
69 75anti-parallel
Strand 3
F
8 14anti-parallel
Strand 4
F
137 140anti-parallel
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There are 5 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
146 149first strand
Strand 2
F
196 203anti-parallel
Strand 3
F
215 221anti-parallel
Strand 4
F
161 167anti-parallel
Strand 5
F
258 263anti-parallel
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