Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZPP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZPP entry

There is 1 chain in PDB entry 3ZPP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 139LYS 559
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3ZPP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
156 170Right-handed alpha
Helix 2
2
A
171 173Right-handed 310
Helix 3
3
A
320 325Right-handed alpha
Helix 4
4
A
423 427Right-handed 310
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There are 3 sheets in PDB entry 3ZPP. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 13 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
175 178parallel
Strand 3
A
195 199parallel
Strand 4
A
236 242parallel
Strand 5
A
276 282parallel
Strand 6
A
301 306parallel
Strand 7
A
352 357parallel
Strand 8
A
387 392parallel
Strand 9
A
410 415parallel
Strand 10
A
454 459parallel
Strand 11
A
487 492parallel
Strand 12
A
517 520parallel
Strand 13
A
540 543parallel
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There are 12 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 185first strand
Strand 2
A
203 207parallel
Strand 3
A
245 247parallel
Strand 4
A
285 290parallel
Strand 5
A
309 314parallel
Strand 6
A
360 362parallel
Strand 7
A
395 397parallel
Strand 8
A
418 421parallel
Strand 9
A
462 465parallel
Strand 10
A
495 498parallel
Strand 11
A
523 525parallel
Strand 12
A
546 548parallel
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There are 12 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
216 220parallel
Strand 3
A
268 274parallel
Strand 4
A
295 298parallel
Strand 5
A
328 333parallel
Strand 6
A
372 375parallel
Strand 7
A
402 406parallel
Strand 8
A
435 440parallel
Strand 9
A
470 476parallel
Strand 10
A
508 511parallel
Strand 11
A
531 534parallel
Strand 12
A
557 558parallel
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