Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZPY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZPY entry

There are 2 chains in PDB entry 3ZPY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 199ASN 446
B
 ASN 200ASN 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3ZPY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
201 207Right-handed alpha
Helix 2
2
A
231 235Right-handed 310
Helix 3
3
A
239 243Right-handed 310
Helix 4
4
A
359 364Right-handed alpha
Helix 5
5
B
201 207Right-handed alpha
Helix 6
6
B
231 235Right-handed 310
Helix 7
7
B
359 364Right-handed alpha
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There are 8 sheets in PDB entry 3ZPY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
213 219anti-parallel
Strand 3
A
274 281anti-parallel
Strand 4
A
284 285anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
213 219anti-parallel
Strand 3
A
274 281anti-parallel
Strand 4
A
414 421anti-parallel
Strand 5
A
315 323anti-parallel
Strand 6
A
336 344anti-parallel
Strand 7
A
352 358anti-parallel
Strand 8
A
369 375anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
274 281anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
256 261anti-parallel
Strand 3
A
433 446anti-parallel
Strand 4
A
294 305anti-parallel
Strand 5
A
380 387anti-parallel
Strand 6
A
390 395anti-parallel
Strand 7
A
398 404anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 229first strand
Strand 2
B
213 219anti-parallel
Strand 3
B
274 281anti-parallel
Strand 4
B
284 285anti-parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 229first strand
Strand 2
B
213 219anti-parallel
Strand 3
B
274 281anti-parallel
Strand 4
B
414 421anti-parallel
Strand 5
B
315 323anti-parallel
Strand 6
B
336 344anti-parallel
Strand 7
B
352 358anti-parallel
Strand 8
B
369 375anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 285first strand
Strand 2
B
274 281anti-parallel
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There are 7 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 251first strand
Strand 2
B
256 261anti-parallel
Strand 3
B
433 446anti-parallel
Strand 4
B
294 305anti-parallel
Strand 5
B
380 387anti-parallel
Strand 6
B
390 395anti-parallel
Strand 7
B
398 404anti-parallel
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