Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZQ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZQ4 entry

There are 4 chains in PDB entry 3ZQ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 6VAL 555
C
 ASN 6VAL 555
D
 ASN 6VAL 555
E
 ASN 6VAL 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 83 helices in PDB entry 3ZQ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 62Right-handed alpha
Helix 2
2
A
76 81Right-handed alpha
Helix 3
3
A
82 88Right-handed alpha
Helix 4
4
A
97 112Right-handed alpha
Helix 5
5
A
177 187Right-handed alpha
Helix 6
6
A
207 222Right-handed alpha
Helix 7
7
A
234 247Right-handed alpha
Helix 8
8
A
256 268Right-handed alpha
Helix 9
9
A
269 271Right-handed 310
Helix 10
10
A
275 277Right-handed 310
Helix 11
11
A
281 285Right-handed 310
Helix 12
12
A
289 291Right-handed 310
Helix 13
13
A
306 313Right-handed alpha
Helix 14
14
A
337 351Right-handed alpha
Helix 15
15
A
370 381Right-handed alpha
Helix 16
16
A
392 406Right-handed alpha
Helix 17
17
A
409 412Right-handed 310
Helix 18
18
A
451 465Right-handed alpha
Helix 19
19
A
493 498Right-handed alpha
Helix 20
20
A
499 517Right-handed alpha
Helix 21
21
A
522 543Right-handed alpha
Helix 22
22
C
57 62Right-handed alpha
Helix 23
23
C
63 65Right-handed 310
Helix 24
24
C
76 81Right-handed alpha
Helix 25
25
C
82 88Right-handed alpha
Helix 26
26
C
97 112Right-handed alpha
Helix 27
27
C
177 187Right-handed alpha
Helix 28
28
C
207 222Right-handed alpha
Helix 29
29
C
234 247Right-handed alpha
Helix 30
30
C
256 268Right-handed alpha
Helix 31
31
C
269 271Right-handed 310
Helix 32
32
C
275 278Right-handed 310
Helix 33
33
C
281 288Right-handed 310
Helix 34
34
C
289 291Right-handed 310
Helix 35
35
C
306 313Right-handed alpha
Helix 36
36
C
337 351Right-handed alpha
Helix 37
37
C
370 379Right-handed alpha
Helix 38
38
C
392 406Right-handed alpha
Helix 39
39
C
409 412Right-handed 310
Helix 40
40
C
451 465Right-handed alpha
Helix 41
41
C
501 519Right-handed alpha
Helix 42
42
C
523 543Right-handed alpha
Helix 43
43
D
57 62Right-handed alpha
Helix 44
44
D
76 81Right-handed alpha
Helix 45
45
D
82 88Right-handed alpha
Helix 46
46
D
97 112Right-handed alpha
Helix 47
47
D
177 187Right-handed alpha
Helix 48
48
D
207 222Right-handed alpha
Helix 49
49
D
234 247Right-handed alpha
Helix 50
50
D
256 268Right-handed alpha
Helix 51
51
D
269 271Right-handed 310
Helix 52
52
D
275 277Right-handed 310
Helix 53
53
D
281 288Right-handed 310
Helix 54
54
D
289 291Right-handed 310
Helix 55
55
D
306 313Right-handed alpha
Helix 56
56
D
337 351Right-handed alpha
Helix 57
57
D
370 381Right-handed alpha
Helix 58
58
D
392 406Right-handed alpha
Helix 59
59
D
409 412Right-handed 310
Helix 60
60
D
453 464Right-handed alpha
Helix 61
61
D
475 478Right-handed 310
Helix 62
62
D
499 516Right-handed alpha
Helix 63
63
D
523 543Right-handed alpha
Helix 64
64
E
57 62Right-handed alpha
Helix 65
65
E
76 81Right-handed alpha
Helix 66
66
E
82 88Right-handed alpha
Helix 67
67
E
97 112Right-handed alpha
Helix 68
68
E
177 187Right-handed alpha
Helix 69
69
E
207 222Right-handed alpha
Helix 70
70
E
234 247Right-handed alpha
Helix 71
71
E
256 268Right-handed alpha
Helix 72
72
E
269 271Right-handed 310
Helix 73
73
E
275 277Right-handed 310
Helix 74
74
E
281 288Right-handed 310
Helix 75
75
E
289 291Right-handed 310
Helix 76
76
E
306 313Right-handed alpha
Helix 77
77
E
337 351Right-handed alpha
Helix 78
78
E
370 381Right-handed alpha
Helix 79
79
E
392 406Right-handed alpha
Helix 80
80
E
409 412Right-handed 310
Helix 81
81
E
451 465Right-handed alpha
Helix 82
82
E
499 518Right-handed alpha
Helix 83
83
E
522 543Right-handed alpha
Back to top of page

There are 20 sheets in PDB entry 3ZQ4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, CA, CB, CC, CD, CE, A, DB, C, DD, DE, EA, EB, EC, ED, EE,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
94 96parallel
Strand 3
A
67 72parallel
Strand 4
A
32 38parallel
Strand 5
A
24 29anti-parallel
Strand 6
A
9 15anti-parallel
Strand 7
A
421 425anti-parallel
Strand 8
A
428 431anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 55first strand
Strand 2
A
439 443anti-parallel
Strand 3
A
446 447anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
147 154anti-parallel
Strand 4
A
157 161anti-parallel
Strand 5
A
189 195parallel
Strand 6
A
383 389parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
251 255parallel
Strand 3
A
293 297parallel
Strand 4
A
226 229parallel
Strand 5
A
326 329parallel
Strand 6
A
354 356parallel
Back to list of sheets
Back to top of page

There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 489first strand
Strand 2
A
466 473anti-parallel
Strand 3
A
547 554parallel
Back to list of sheets
Back to top of page

There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 121first strand
Strand 2
C
94 96parallel
Strand 3
C
67 72parallel
Strand 4
C
32 36parallel
Strand 5
C
24 29anti-parallel
Strand 6
C
9 15anti-parallel
Strand 7
C
421 425anti-parallel
Strand 8
C
428 431anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 55first strand
Strand 2
C
439 442anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
128 130first strand
Strand 2
C
133 139anti-parallel
Strand 3
C
148 154anti-parallel
Strand 4
C
157 161anti-parallel
Strand 5
C
189 195parallel
Strand 6
C
383 389parallel
Back to list of sheets
Back to top of page

There are 5 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
251 255first strand
Strand 2
C
293 297parallel
Strand 3
C
226 229parallel
Strand 4
C
326 329parallel
Strand 5
C
354 356parallel
Back to list of sheets
Back to top of page

There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
479 489first strand
Strand 2
C
466 474anti-parallel
Strand 3
C
547 554parallel
Back to list of sheets
Back to top of page

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
119 121first strand
Strand 2
D
94 96parallel
Strand 3
D
67 72parallel
Strand 4
D
32 36parallel
Strand 5
D
24 29anti-parallel
Strand 6
D
9 15anti-parallel
Strand 7
D
421 425anti-parallel
Strand 8
D
428 431anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 55first strand
Strand 2
D
439 442anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 130first strand
Strand 2
D
133 140anti-parallel
Strand 3
D
147 154anti-parallel
Strand 4
D
157 161anti-parallel
Strand 5
D
189 195parallel
Strand 6
D
383 389parallel
Back to list of sheets
Back to top of page

There are 6 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
279 280first strand
Strand 2
D
251 255parallel
Strand 3
D
293 297parallel
Strand 4
D
226 229parallel
Strand 5
D
326 329parallel
Strand 6
D
354 356parallel
Back to list of sheets
Back to top of page

There are 3 strands in DE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
479 489first strand
Strand 2
D
466 474anti-parallel
Strand 3
D
547 554parallel
Back to list of sheets
Back to top of page

There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
119 121first strand
Strand 2
E
94 96parallel
Strand 3
E
67 72parallel
Strand 4
E
32 36parallel
Strand 5
E
24 29anti-parallel
Strand 6
E
9 15anti-parallel
Strand 7
E
421 425anti-parallel
Strand 8
E
428 431anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
52 55first strand
Strand 2
E
439 443anti-parallel
Strand 3
E
446 447anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 130first strand
Strand 2
E
133 139anti-parallel
Strand 3
E
148 154anti-parallel
Strand 4
E
157 161anti-parallel
Strand 5
E
189 195parallel
Strand 6
E
383 389parallel
Back to list of sheets
Back to top of page

There are 6 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
279 280first strand
Strand 2
E
251 255parallel
Strand 3
E
293 297parallel
Strand 4
E
226 229parallel
Strand 5
E
326 329parallel
Strand 6
E
354 356parallel
Back to list of sheets
Back to top of page

There are 3 strands in EE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
479 489first strand
Strand 2
E
466 474anti-parallel
Strand 3
E
547 554parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il