Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZQ5 entry

There is 1 chain in PDB entry 3ZQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2HIS 518
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3ZQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 17Right-handed alpha
Helix 2
2
A
19 23Right-handed 310
Helix 3
3
A
48 54Right-handed alpha
Helix 4
4
A
56 61Right-handed alpha
Helix 5
5
A
64 69Right-handed alpha
Helix 6
6
A
82 89Right-handed alpha
Helix 7
7
A
135 150Right-handed alpha
Helix 8
8
A
152 169Right-handed alpha
Helix 9
9
A
204 208Right-handed 310
Helix 10
10
A
209 219Right-handed alpha
Helix 11
11
A
257 267Right-handed alpha
Helix 12
12
A
298 345Right-handed alpha
Helix 13
13
A
347 354Right-handed alpha
Helix 14
14
A
355 362Right-handed alpha
Helix 15
15
A
384 398Right-handed alpha
Helix 16
16
A
408 412Right-handed 310
Helix 17
17
A
413 418Right-handed 310
Helix 18
18
A
419 424Right-handed alpha
Helix 19
19
A
453 457Right-handed 310
Helix 20
20
A
490 518Right-handed alpha
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There are 4 sheets in PDB entry 3ZQ5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
459 463anti-parallel
Strand 3
A
466 470anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
232 235anti-parallel
Strand 3
A
41 46anti-parallel
Strand 4
A
31 36anti-parallel
Strand 5
A
118 124anti-parallel
Strand 6
A
102 112anti-parallel
Strand 7
A
92 98anti-parallel
Strand 8
A
70 71anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 224first strand
Strand 2
A
271 279anti-parallel
Strand 3
A
282 291anti-parallel
Strand 4
A
172 178anti-parallel
Strand 5
A
184 191anti-parallel
Strand 6
A
201 203anti-parallel
Strand 7
A
446 450parallel
Strand 8
A
478 482anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 380first strand
Strand 2
A
367 372anti-parallel
Strand 3
A
435 441anti-parallel
Strand 4
A
425 431anti-parallel
Strand 5
A
404 406anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il