Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZQP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZQP entry

There are 9 chains in PDB entry 3ZQP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 66ASP 140
B
 LYS 66SER 141
C
 LYS 65SER 141
D
 LYS 66ASP 140
E
 LYS 65ASP 140
F
 LYS 66ASP 140
G
 LYS 66SER 141
H
 LYS 65SER 141
I
 LYS 65ASP 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3ZQP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 82Right-handed alpha
Helix 2
2
A
106 121Right-handed alpha
Helix 3
3
B
69 82Right-handed alpha
Helix 4
4
B
106 121Right-handed alpha
Helix 5
5
C
69 82Right-handed alpha
Helix 6
6
C
106 121Right-handed alpha
Helix 7
7
D
69 82Right-handed alpha
Helix 8
8
D
106 121Right-handed alpha
Helix 9
9
E
69 82Right-handed alpha
Helix 10
10
E
106 121Right-handed alpha
Helix 11
11
F
69 82Right-handed alpha
Helix 12
12
F
106 121Right-handed alpha
Helix 13
13
G
69 82Right-handed alpha
Helix 14
14
G
106 121Right-handed alpha
Helix 15
15
H
69 82Right-handed alpha
Helix 16
16
H
106 121Right-handed alpha
Helix 17
17
I
69 82Right-handed alpha
Helix 18
18
I
106 121Right-handed alpha
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There are 10 sheets in PDB entry 3ZQP. Click on sheet of interest to get list of strands forming it: AA, AB, BA, CA, A, EA, FA, GA, HA, IA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 94first strand
Strand 2
A
97 104anti-parallel
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There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 139first strand
Strand 2
I
125 139parallel
Strand 3
H
125 140parallel
Strand 4
G
125 140parallel
Strand 5
F
125 137parallel
Strand 6
E
125 139parallel
Strand 7
D
125 138parallel
Strand 8
C
125 138parallel
Strand 9
B
125 139parallel
Strand 10
A
125 139parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 94first strand
Strand 2
B
97 104anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 94first strand
Strand 2
C
97 104anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 94first strand
Strand 2
D
97 104anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 94first strand
Strand 2
E
97 104anti-parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 94first strand
Strand 2
F
97 104anti-parallel
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There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
86 94first strand
Strand 2
G
97 104anti-parallel
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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
86 94first strand
Strand 2
H
97 104anti-parallel
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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
86 94first strand
Strand 2
I
97 104anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il