Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZRP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZRP entry

There are 2 chains in PDB entry 3ZRP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6SER 382
B
 LEU 6SER 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3ZRP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 21Right-handed alpha
Helix 2
2
A
30 49Right-handed alpha
Helix 3
3
A
62 70Right-handed alpha
Helix 4
4
A
71 74Right-handed 310
Helix 5
5
A
86 97Right-handed alpha
Helix 6
6
A
115 126Right-handed alpha
Helix 7
7
A
145 154Right-handed alpha
Helix 8
8
A
203 213Right-handed alpha
Helix 9
9
A
222 235Right-handed alpha
Helix 10
10
A
245 263Right-handed alpha
Helix 11
11
A
263 285Right-handed alpha
Helix 12
12
A
293 296Right-handed 310
Helix 13
13
A
310 320Right-handed alpha
Helix 14
14
A
345 364Right-handed alpha
Helix 15
15
A
371 382Right-handed alpha
Helix 16
16
B
14 20Right-handed alpha
Helix 17
17
B
21 23Right-handed 310
Helix 18
18
B
30 49Right-handed alpha
Helix 19
19
B
62 70Right-handed alpha
Helix 20
20
B
71 74Right-handed 310
Helix 21
21
B
86 97Right-handed alpha
Helix 22
22
B
115 126Right-handed alpha
Helix 23
23
B
145 154Right-handed alpha
Helix 24
24
B
203 213Right-handed alpha
Helix 25
25
B
222 235Right-handed alpha
Helix 26
26
B
245 263Right-handed alpha
Helix 27
27
B
263 285Right-handed alpha
Helix 28
28
B
293 296Right-handed 310
Helix 29
29
B
310 320Right-handed alpha
Helix 30
30
B
345 364Right-handed alpha
Helix 31
31
B
371 382Right-handed alpha
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There are 4 sheets in PDB entry 3ZRP. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
197 202anti-parallel
Strand 3
A
182 186anti-parallel
Strand 4
A
157 163parallel
Strand 5
A
128 134parallel
Strand 6
A
79 83parallel
Strand 7
A
102 106parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 305first strand
Strand 2
A
335 339anti-parallel
Strand 3
A
326 327anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 60first strand
Strand 2
B
197 202anti-parallel
Strand 3
B
182 186anti-parallel
Strand 4
B
157 163parallel
Strand 5
B
128 134parallel
Strand 6
B
79 83parallel
Strand 7
B
102 106parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 289first strand
Strand 2
B
301 305anti-parallel
Strand 3
B
335 339anti-parallel
Strand 4
B
326 327anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il