Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZS6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZS6 entry

There are 2 chains in PDB entry 3ZS6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 48LYS 553
B
 ASP 1ALA 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3ZS6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 70Right-handed 310
Helix 2
2
A
72 83Right-handed alpha
Helix 3
3
A
128 141Right-handed alpha
Helix 4
4
A
142 145Right-handed 310
Helix 5
5
A
148 154Right-handed 310
Helix 6
6
A
157 163Right-handed alpha
Helix 7
7
A
167 171Right-handed 310
Helix 8
8
A
191 196Right-handed alpha
Helix 9
9
A
197 202Right-handed 310
Helix 10
10
A
205 213Right-handed alpha
Helix 11
11
A
214 216Right-handed 310
Helix 12
12
A
249 253Right-handed 310
Helix 13
13
A
265 275Right-handed alpha
Helix 14
14
A
288 297Right-handed alpha
Helix 15
15
A
322 333Right-handed alpha
Helix 16
16
A
334 342Right-handed alpha
Helix 17
17
A
367 372Right-handed 310
Helix 18
18
A
373 388Right-handed alpha
Helix 19
19
A
405 424Right-handed alpha
Helix 20
20
A
433 443Right-handed alpha
Helix 21
21
A
460 465Right-handed alpha
Helix 22
22
A
480 491Right-handed alpha
Helix 23
23
A
495 512Right-handed alpha
Helix 24
24
A
545 549Right-handed 310
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There are 6 sheets in PDB entry 3ZS6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 58first strand
Strand 2
A
257 262parallel
Strand 3
A
238 243anti-parallel
Strand 4
A
228 234anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
95 97anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 107first strand
Strand 2
A
110 115anti-parallel
Strand 3
A
180 184anti-parallel
Strand 4
A
173 177anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
526 527anti-parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
517 523anti-parallel
Strand 3
A
304 313anti-parallel
Strand 4
A
448 454anti-parallel
Strand 5
A
397 403parallel
Strand 6
A
426 432parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 533first strand
Strand 2
A
550 551anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il