Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZS9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZS9 entry

There are 4 chains in PDB entry 3ZS9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5ASP 352
B
 THR 4LEU 350
C
 LEU 504THR 534
D
 LEU 504SER 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3ZS9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed alpha
Helix 2
2
A
30 46Right-handed alpha
Helix 3
3
A
61 67Right-handed alpha
Helix 4
4
A
89 100Right-handed alpha
Helix 5
5
A
129 133Right-handed 310
Helix 6
6
A
135 154Right-handed alpha
Helix 7
7
A
169 187Right-handed alpha
Helix 8
8
A
213 231Right-handed alpha
Helix 9
9
A
245 262Right-handed alpha
Helix 10
10
A
285 306Right-handed alpha
Helix 11
11
A
323 336Right-handed alpha
Helix 12
12
A
339 344Right-handed alpha
Helix 13
13
A
345 349Right-handed 310
Helix 14
14
B
9 14Right-handed alpha
Helix 15
15
B
30 46Right-handed alpha
Helix 16
16
B
61 67Right-handed alpha
Helix 17
17
B
89 100Right-handed alpha
Helix 18
18
B
129 133Right-handed 310
Helix 19
19
B
135 153Right-handed alpha
Helix 20
20
B
169 197Right-handed alpha
Helix 21
21
B
212 231Right-handed alpha
Helix 22
22
B
245 262Right-handed alpha
Helix 23
23
B
285 306Right-handed alpha
Helix 24
24
B
323 336Right-handed alpha
Helix 25
25
B
339 344Right-handed alpha
Helix 26
26
B
345 349Right-handed 310
Helix 27
27
C
505 522Right-handed alpha
Helix 28
28
C
524 534Right-handed alpha
Helix 29
29
D
505 521Right-handed alpha
Helix 30
30
D
524 537Right-handed alpha
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There are 2 sheets in PDB entry 3ZS9. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
51 55parallel
Strand 4
A
162 166parallel
Strand 5
A
20 24parallel
Strand 6
A
236 243parallel
Strand 7
A
268 274parallel
Strand 8
A
310 315parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 87anti-parallel
Strand 3
B
51 55parallel
Strand 4
B
162 166parallel
Strand 5
B
20 25parallel
Strand 6
B
236 243parallel
Strand 7
B
268 274parallel
Strand 8
B
310 315parallel
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