Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZTH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZTH entry

There are 2 chains in PDB entry 3ZTH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 348
B
 MSE 1SER 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3ZTH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 44Right-handed alpha
Helix 2
2
A
48 53Right-handed alpha
Helix 3
3
A
54 56Right-handed 310
Helix 4
4
A
82 90Right-handed alpha
Helix 5
5
A
96 107Right-handed alpha
Helix 6
6
A
108 131Right-handed alpha
Helix 7
7
A
150 158Right-handed alpha
Helix 8
8
A
171 175Right-handed 310
Helix 9
9
A
176 193Right-handed alpha
Helix 10
10
A
206 210Right-handed 310
Helix 11
11
A
211 229Right-handed alpha
Helix 12
12
A
250 252Right-handed 310
Helix 13
13
A
266 278Right-handed alpha
Helix 14
14
A
285 297Right-handed alpha
Helix 15
15
A
298 300Right-handed 310
Helix 16
16
A
311 325Right-handed alpha
Helix 17
17
A
338 346Right-handed alpha
Helix 18
18
B
27 43Right-handed alpha
Helix 19
19
B
48 53Right-handed alpha
Helix 20
20
B
54 56Right-handed 310
Helix 21
21
B
82 89Right-handed alpha
Helix 22
22
B
96 107Right-handed alpha
Helix 23
23
B
111 133Right-handed alpha
Helix 24
24
B
150 159Right-handed alpha
Helix 25
25
B
171 175Right-handed 310
Helix 26
26
B
176 194Right-handed alpha
Helix 27
27
B
206 210Right-handed 310
Helix 28
28
B
211 229Right-handed alpha
Helix 29
29
B
250 252Right-handed 310
Helix 30
30
B
266 276Right-handed alpha
Helix 31
31
B
285 297Right-handed alpha
Helix 32
32
B
298 300Right-handed 310
Helix 33
33
B
311 325Right-handed alpha
Helix 34
34
B
338 346Right-handed alpha
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There are 8 sheets in PDB entry 3ZTH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
2 5anti-parallel
Strand 3
A
62 63anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
199 204parallel
Strand 3
A
232 237parallel
Strand 4
A
20 24parallel
Strand 5
A
254 257parallel
Strand 6
A
261 263anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
140 141anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
168 170anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 16first strand
Strand 2
B
2 5anti-parallel
Strand 3
B
62 63anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 80first strand
Strand 2
B
199 204parallel
Strand 3
B
232 237parallel
Strand 4
B
20 24parallel
Strand 5
B
254 257parallel
Strand 6
B
261 263anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 137first strand
Strand 2
B
140 141anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
168 169anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il