Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZTJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ZTJ entry

There are 5 chains in PDB entry 3ZTJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 9	LYS 326
B	GLY 1	GLN 172
C	SER 9	PRO 324
D	GLY 1	GLN 172
E	SER 9	THR 313

There are 40 helices in PDB entry 3ZTJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	65	72	Right-handed alpha
Helix 2	2	A	73	80	Right-handed 310
Helix 3	3	A	104	116	Right-handed alpha
Helix 4	4	A	187	195	Right-handed alpha
Helix 5	5	B	38	56	Right-handed alpha
Helix 6	6	B	75	126	Right-handed alpha
Helix 7	7	B	147	154	Right-handed alpha
Helix 8	8	B	159	172	Right-handed alpha
Helix 9	9	C	65	72	Right-handed alpha
Helix 10	10	C	73	80	Right-handed 310
Helix 11	11	C	104	116	Right-handed alpha
Helix 12	12	C	187	196	Right-handed alpha
Helix 13	13	D	4	10	Right-handed alpha
Helix 14	14	D	37	56	Right-handed alpha
Helix 15	15	D	75	126	Right-handed alpha
Helix 16	16	D	145	154	Right-handed alpha
Helix 17	17	D	159	172	Right-handed alpha
Helix 18	18	E	65	72	Right-handed alpha
Helix 19	19	E	73	80	Right-handed 310
Helix 20	20	E	104	116	Right-handed alpha
Helix 21	21	E	187	196	Right-handed alpha
Helix 22	22	F	37	57	Right-handed alpha
Helix 23	23	F	75	126	Right-handed alpha
Helix 24	24	F	145	154	Right-handed alpha
Helix 25	25	F	162	172	Right-handed alpha
Helix 26	26	G	28	30	Right-handed 310
Helix 27	27	G	83	87	Right-handed 310
Helix 28	28	I	28	30	Right-handed 310
Helix 29	29	I	61	64	Right-handed 310
Helix 30	30	I	83	87	Right-handed 310
Helix 31	31	I	181	185	Right-handed 310
Helix 32	32	J	123	127	Right-handed 310
Helix 33	33	J	183	187	Right-handed alpha
Helix 34	34	K	28	30	Right-handed 310
Helix 35	35	K	61	64	Right-handed 310
Helix 36	36	K	83	87	Right-handed 310
Helix 37	37	K	183	185	Right-handed 310
Helix 38	38	L	79	83	Right-handed 310
Helix 39	39	L	121	126	Right-handed alpha
Helix 40	40	L	182	187	Right-handed alpha

There are 65 sheets in PDB entry 3ZTJ. Click on sheet of interest to get list of strands forming it: BA, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, A, CA, CB, CC, CD, CE, CF, CG, CH, CI, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, FA, GA, GB, GC, GD, GE, HA, HB, HC, IA, IB, IC, ID, IE, IF, JA, JB, JC, JD, KA, KB, KC, KD, KE, KF, KG, KH, LA, LB, LC, LD, LE, LF, LG,

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	37	first strand
Strand 2	B	22	27	anti-parallel
Strand 3	A	12	17	anti-parallel
Strand 4	B	137	140	anti-parallel
Strand 5	B	130	132	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	26	first strand
Strand 2	A	34	36	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	315	317	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	294	295	parallel
Strand 3	A	307	308	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	274	278	parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	86	89	parallel
Strand 3	A	266	269	parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	229	237	parallel
Strand 3	A	176	184	anti-parallel
Strand 4	A	251	254	anti-parallel
Strand 5	A	151	153	anti-parallel

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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	229	237	parallel
Strand 3	A	176	184	anti-parallel
Strand 4	A	256	259	anti-parallel
Strand 5	A	120	122	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	131	first strand
Strand 2	A	155	156	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	141	first strand
Strand 2	A	144	146	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	242	247	anti-parallel
Strand 3	A	202	205	anti-parallel
Strand 4	A	210	213	anti-parallel

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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	36	first strand
Strand 2	D	22	27	anti-parallel
Strand 3	C	11	17	anti-parallel
Strand 4	D	137	140	anti-parallel
Strand 5	D	130	132	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	25	first strand
Strand 2	C	35	36	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	315	317	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	294	295	parallel
Strand 3	C	307	308	parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	54	first strand
Strand 2	C	274	278	parallel

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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	86	89	parallel
Strand 3	C	266	269	parallel

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There are 6 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	229	237	parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	251	254	anti-parallel
Strand 5	C	151	156	anti-parallel
Strand 6	C	130	134	anti-parallel

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There are 5 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	229	237	parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	256	259	parallel
Strand 5	C	120	122	anti-parallel

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There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	165	first strand
Strand 2	C	244	249	anti-parallel
Strand 3	C	201	205	anti-parallel
Strand 4	C	210	213	anti-parallel

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There are 2 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	281	282	first strand
Strand 2	C	287	288	anti-parallel

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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	17	first strand
Strand 2	F	22	28	anti-parallel
Strand 3	F	31	36	anti-parallel

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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	26	first strand
Strand 2	E	34	36	anti-parallel

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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	41	first strand
Strand 2	E	315	317	anti-parallel

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There are 3 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	44	first strand
Strand 2	E	294	295	parallel
Strand 3	E	307	308	parallel

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There are 2 strands in EE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	54	first strand
Strand 2	E	274	278	parallel

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There are 3 strands in EF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	60	first strand
Strand 2	E	86	90	parallel
Strand 3	E	266	270	parallel

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There are 5 strands in EG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	101	first strand
Strand 2	E	229	237	parallel
Strand 3	E	176	184	anti-parallel
Strand 4	E	251	254	anti-parallel
Strand 5	E	151	153	anti-parallel

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There are 5 strands in EH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	101	first strand
Strand 2	E	229	237	parallel
Strand 3	E	176	184	anti-parallel
Strand 4	E	256	259	anti-parallel
Strand 5	E	120	122	anti-parallel

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There are 4 strands in EI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	164	169	first strand
Strand 2	E	242	247	anti-parallel
Strand 3	E	202	205	anti-parallel
Strand 4	E	210	213	anti-parallel

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There are 3 strands in EJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	288	first strand
Strand 2	E	281	283	anti-parallel
Strand 3	E	302	303	anti-parallel

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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	130	132	first strand
Strand 2	F	138	140	anti-parallel

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There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	6	7	first strand
Strand 2	G	17	23	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	68	72	anti-parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	110	111	first strand

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There are 4 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	45	51	anti-parallel
Strand 3	G	32	39	anti-parallel
Strand 4	G	89	91	anti-parallel

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There are 5 strands in GD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	45	51	anti-parallel
Strand 3	G	32	39	anti-parallel
Strand 4	G	93	98	anti-parallel
Strand 5	G	100	103	anti-parallel

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There are 2 strands in GE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	89	91	first strand
Strand 2	G	32	39	anti-parallel

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There are 3 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	22	24	first strand
Strand 2	H	70	74	anti-parallel
Strand 3	H	63	65	anti-parallel

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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	27	first strand
Strand 2	H	30	31	anti-parallel

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There are 3 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	46	first strand
Strand 2	H	33	38	anti-parallel
Strand 3	H	85	90	anti-parallel

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There are 4 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	11	first strand
Strand 2	I	107	110	anti-parallel
Strand 3	I	88	98	anti-parallel
Strand 4	I	100	103	anti-parallel

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There are 6 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	11	first strand
Strand 2	I	107	110	anti-parallel
Strand 3	I	88	98	anti-parallel
Strand 4	I	32	39	anti-parallel
Strand 5	I	45	51	anti-parallel
Strand 6	I	57	59	anti-parallel

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There are 2 strands in IC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	100	103	first strand
Strand 2	I	88	98	anti-parallel

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There are 3 strands in ID sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	19	23	first strand
Strand 2	I	77	82	anti-parallel
Strand 3	I	67	72	anti-parallel

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There are 4 strands in IE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	120	124	first strand
Strand 2	I	133	141	anti-parallel
Strand 3	I	172	179	anti-parallel
Strand 4	I	159	166	anti-parallel

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There are 2 strands in IF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	191	196	first strand
Strand 2	I	201	206	anti-parallel

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There are 4 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	5	7	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	70	75	anti-parallel
Strand 4	J	62	63	anti-parallel

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There are 5 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	54	first strand
Strand 2	J	45	49	anti-parallel
Strand 3	J	33	38	anti-parallel
Strand 4	J	85	90	anti-parallel
Strand 5	J	97	98	anti-parallel

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There are 4 strands in JC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	114	118	first strand
Strand 2	J	129	139	anti-parallel
Strand 3	J	173	182	anti-parallel
Strand 4	J	159	163	anti-parallel

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There are 3 strands in JD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	148	150	first strand
Strand 2	J	191	196	anti-parallel
Strand 3	J	205	210	anti-parallel

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There are 4 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	7	first strand
Strand 2	K	19	25	anti-parallel
Strand 3	K	77	82	anti-parallel
Strand 4	K	67	72	anti-parallel

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There are 4 strands in KB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	108	111	anti-parallel
Strand 3	K	88	98	anti-parallel
Strand 4	K	100	103	anti-parallel

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There are 6 strands in KC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	108	111	anti-parallel
Strand 3	K	88	98	anti-parallel
Strand 4	K	32	39	anti-parallel
Strand 5	K	46	51	anti-parallel
Strand 6	K	57	59	anti-parallel

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There are 2 strands in KD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	100	103	first strand
Strand 2	K	88	98	anti-parallel

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There are 4 strands in KE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	120	124	first strand
Strand 2	K	131	141	anti-parallel
Strand 3	K	172	181	anti-parallel
Strand 4	K	165	166	parallel

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There are 4 strands in KF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	120	124	first strand
Strand 2	K	131	141	anti-parallel
Strand 3	K	172	181	anti-parallel
Strand 4	K	159	161	anti-parallel

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There are 2 strands in KG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	165	166	first strand
Strand 2	K	172	181	parallel

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There are 3 strands in KH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	150	first strand
Strand 2	K	191	196	anti-parallel
Strand 3	K	204	206	anti-parallel

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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	62	67	anti-parallel

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There are 4 strands in LB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	102	106	parallel
Strand 3	L	85	90	anti-parallel
Strand 4	L	97	98	anti-parallel

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There are 6 strands in LC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	102	106	parallel
Strand 3	L	85	90	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	49	anti-parallel
Strand 6	L	53	54	anti-parallel

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There are 2 strands in LD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	97	98	first strand
Strand 2	L	85	90	anti-parallel

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There are 2 strands in LE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	27	27	first strand
Strand 2	L	30	31	anti-parallel

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There are 4 strands in LF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	114	118	first strand
Strand 2	L	130	137	anti-parallel
Strand 3	L	174	181	anti-parallel
Strand 4	L	159	163	anti-parallel

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There are 3 strands in LG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	146	150	first strand
Strand 2	L	192	196	anti-parallel
Strand 3	L	208	209	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ZTJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZTJ