Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZUQ entry

There is 1 chain in PDB entry 3ZUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 892
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3ZUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 28Right-handed 310
Helix 2
2
A
55 60Right-handed 310
Helix 3
3
A
81 100Right-handed alpha
Helix 4
4
A
102 115Right-handed alpha
Helix 5
5
A
183 185Right-handed 310
Helix 6
6
A
223 240Right-handed alpha
Helix 7
7
A
265 273Right-handed alpha
Helix 8
8
A
275 280Right-handed 310
Helix 9
9
A
281 306Right-handed alpha
Helix 10
10
A
316 329Right-handed alpha
Helix 11
11
A
341 354Right-handed alpha
Helix 12
12
A
357 366Right-handed alpha
Helix 13
13
A
400 404Right-handed 310
Helix 14
14
A
406 410Right-handed 310
Helix 15
15
A
417 419Right-handed 310
Helix 16
16
A
487 489Right-handed 310
Helix 17
17
A
494 498Right-handed 310
Helix 18
18
A
500 504Right-handed 310
Helix 19
19
A
522 529Right-handed alpha
Helix 20
20
A
571 578Right-handed alpha
Helix 21
21
A
593 600Right-handed alpha
Helix 22
22
A
609 617Right-handed alpha
Helix 23
23
A
621 623Right-handed 310
Helix 24
24
A
624 641Right-handed alpha
Helix 25
25
A
658 664Right-handed alpha
Helix 26
26
A
673 682Right-handed alpha
Helix 27
27
A
683 687Right-handed 310
Helix 28
28
A
709 743Right-handed alpha
Helix 29
29
A
743 776Right-handed alpha
Helix 30
30
A
777 784Right-handed alpha
Helix 31
31
A
787 822Right-handed alpha
Helix 32
32
A
822 847Right-handed alpha
Helix 33
33
A
848 853Right-handed alpha
Helix 34
34
A
855 867Right-handed alpha
Helix 35
35
A
874 878Right-handed 310
Helix 36
36
A
882 891Right-handed alpha
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There are 10 sheets in PDB entry 3ZUQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
191 194anti-parallel
Strand 3
A
158 161parallel
Strand 4
A
43 46parallel
Strand 5
A
34 40anti-parallel
Strand 6
A
19 23anti-parallel
Strand 7
A
137 141anti-parallel
Strand 8
A
151 155anti-parallel
Strand 9
A
542 543anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
559 560anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
429 430anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
308 309parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
180 181anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
199 203anti-parallel
Strand 3
A
378 383anti-parallel
Strand 4
A
421 422anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
338 339anti-parallel
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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 485first strand
Strand 2
A
433 438anti-parallel
Strand 3
A
562 567parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 508first strand
Strand 2
A
701 703parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
589 591first strand
Strand 2
A
603 605parallel
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