Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZUU entry

There are 2 chains in PDB entry 3ZUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 10PRO 319
B
LEU 12PRO 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3ZUU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
59 72Right-handed alpha
Helix 2
2
A
101 110Right-handed alpha
Helix 3
3
A
113 134Right-handed alpha
Helix 4
4
A
137 140Right-handed 310
Helix 5
5
A
179 183Right-handed 310
Helix 6
6
A
184 190Right-handed alpha
Helix 7
7
A
194 213Right-handed alpha
Helix 8
8
A
225 235Right-handed alpha
Helix 9
9
A
247 258Right-handed alpha
Helix 10
10
A
267 273Right-handed alpha
Helix 11
11
A
274 279Right-handed alpha
Helix 12
12
A
304 315Right-handed alpha
Helix 13
13
B
59 71Right-handed alpha
Helix 14
14
B
102 110Right-handed alpha
Helix 15
15
B
113 134Right-handed alpha
Helix 16
16
B
137 140Right-handed 310
Helix 17
17
B
179 183Right-handed 310
Helix 18
18
B
184 190Right-handed alpha
Helix 19
19
B
194 213Right-handed alpha
Helix 20
20
B
225 235Right-handed alpha
Helix 21
21
B
247 258Right-handed alpha
Helix 22
22
B
267 273Right-handed alpha
Helix 23
23
B
274 279Right-handed alpha
Helix 24
24
B
304 317Right-handed alpha
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There are 4 sheets in PDB entry 3ZUU. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
21 27first strand
Strand 2
A
35 40anti-parallel
Strand 3
A
46 53anti-parallel
Strand 4
A
89 95anti-parallel
Strand 5
A
80 85anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
147 148first strand
Strand 2
A
156 157anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
21 27first strand
Strand 2
B
35 40anti-parallel
Strand 3
B
46 53anti-parallel
Strand 4
B
89 95anti-parallel
Strand 5
B
80 85anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 101first strand
Strand 2
B
147 148anti-parallel
Strand 3
B
156 157anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il