Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZUV entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 8 chains in PDB entry 3ZUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LEU 182
A
 GLU 184GLU 184
A
 VAL 186SER 358
B
 ASP 13LYS 134
C
 HIS 0LEU 182
C
 GLU 184GLU 184
C
 VAL 186SER 358
D
 SER 12GLN 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 53 helices in PDB entry 3ZUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
59 76Right-handed alpha
Helix 2
2
A
110 117Right-handed alpha
Helix 3
3
A
120 141Right-handed alpha
Helix 4
4
A
149 151Right-handed 310
Helix 5
5
A
188 192Right-handed 310
Helix 6
6
A
193 198Right-handed 310
Helix 7
7
A
205 222Right-handed alpha
Helix 8
8
A
230 243Right-handed alpha
Helix 9
9
A
246 251Right-handed alpha
Helix 10
10
A
255 264Right-handed alpha
Helix 11
11
A
272 277Right-handed alpha
Helix 12
12
A
281 292Right-handed alpha
Helix 13
13
A
295 299Right-handed 310
Helix 14
14
A
301 307Right-handed alpha
Helix 15
15
A
308 312Right-handed 310
Helix 16
16
A
316 320Right-handed 310
Helix 17
17
A
328 333Right-handed 310
Helix 18
18
A
337 350Right-handed alpha
Helix 19
19
A
351 353Right-handed 310
Helix 20
20
B
13 24Right-handed alpha
Helix 21
21
B
26 36Right-handed alpha
Helix 22
22
B
49 58Right-handed alpha
Helix 23
23
B
59 69Right-handed alpha
Helix 24
24
B
82 90Right-handed alpha
Helix 25
25
B
92 102Right-handed alpha
Helix 26
26
B
115 123Right-handed alpha
Helix 27
27
B
125 134Right-handed alpha
Helix 28
28
C
59 76Right-handed alpha
Helix 29
29
C
110 117Right-handed alpha
Helix 30
30
C
120 141Right-handed alpha
Helix 31
31
C
149 151Right-handed 310
Helix 32
32
C
188 192Right-handed 310
Helix 33
33
C
193 199Right-handed alpha
Helix 34
34
C
206 222Right-handed alpha
Helix 35
35
C
230 243Right-handed alpha
Helix 36
36
C
246 252Right-handed alpha
Helix 37
37
C
255 265Right-handed alpha
Helix 38
38
C
272 277Right-handed alpha
Helix 39
39
C
281 292Right-handed alpha
Helix 40
40
C
301 308Right-handed alpha
Helix 41
41
C
309 312Right-handed 310
Helix 42
42
C
316 320Right-handed 310
Helix 43
43
C
328 333Right-handed 310
Helix 44
44
C
337 350Right-handed alpha
Helix 45
45
C
351 353Right-handed 310
Helix 46
46
D
13 24Right-handed alpha
Helix 47
47
D
26 36Right-handed alpha
Helix 48
48
D
49 57Right-handed alpha
Helix 49
49
D
59 68Right-handed alpha
Helix 50
50
D
82 90Right-handed alpha
Helix 51
51
D
92 102Right-handed alpha
Helix 52
52
D
115 124Right-handed alpha
Helix 53
53
D
125 133Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 3ZUV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, CA, CB, CC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
15 16anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 31first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
47 54anti-parallel
Strand 4
A
99 104anti-parallel
Strand 5
A
86 88anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
153 155anti-parallel
Strand 3
A
161 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
170 171anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 31first strand
Strand 2
C
36 42anti-parallel
Strand 3
C
47 54anti-parallel
Strand 4
C
99 104anti-parallel
Strand 5
C
86 89anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 109first strand
Strand 2
C
153 155anti-parallel
Strand 3
C
161 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
143 144first strand
Strand 2
C
170 171anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il