Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZUZ entry

There are 2 chains in PDB entry 3ZUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 164GLU 469
A
ILE 471ASN 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3ZUZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
171 175Right-handed 310
Helix 2
2
A
178 185Right-handed alpha
Helix 3
3
A
195 199Right-handed 310
Helix 4
4
A
200 216Right-handed alpha
Helix 5
5
A
217 231Right-handed alpha
Helix 6
6
A
232 240Right-handed alpha
Helix 7
7
A
240 246Right-handed alpha
Helix 8
8
A
249 260Right-handed alpha
Helix 9
9
A
274 285Right-handed alpha
Helix 10
10
A
295 316Right-handed alpha
Helix 11
11
A
323 332Right-handed alpha
Helix 12
12
A
332 337Right-handed alpha
Helix 13
13
A
363 377Right-handed alpha
Helix 14
14
A
384 402Right-handed alpha
Helix 15
15
A
402 419Right-handed alpha
Helix 16
16
A
424 430Right-handed alpha
Helix 17
17
A
430 442Right-handed alpha
Helix 18
18
A
443 461Right-handed alpha
Helix 19
19
A
462 465Right-handed 310
Helix 20
20
A
488 505Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 3ZUZ.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
467 471first strand
Strand 2
A
483 487anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il