Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZVK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZVK entry

There are 10 chains in PDB entry 3ZVK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 134
B
 MET 1ASP 133
C
 MET 1ASP 133
D
 MET 1ASP 133
E
 ASN 2SER 58
F
 MET 1GLU 78
G
 ASN 2GLU 78
H
 MET 1SER 57
X
 A 2 A 27
Y
 T 1 T 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3ZVK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 17Right-handed alpha
Helix 2
2
A
18 30Right-handed alpha
Helix 3
3
A
38 51Right-handed alpha
Helix 4
4
A
53 66Right-handed alpha
Helix 5
5
A
74 91Right-handed alpha
Helix 6
6
A
96 110Right-handed alpha
Helix 7
7
B
6 17Right-handed alpha
Helix 8
8
B
18 30Right-handed alpha
Helix 9
9
B
38 51Right-handed alpha
Helix 10
10
B
53 66Right-handed alpha
Helix 11
11
B
75 91Right-handed alpha
Helix 12
12
B
96 110Right-handed alpha
Helix 13
13
B
118 124Right-handed 310
Helix 14
14
C
6 17Right-handed alpha
Helix 15
15
C
18 30Right-handed alpha
Helix 16
16
C
38 51Right-handed alpha
Helix 17
17
C
53 66Right-handed alpha
Helix 18
18
C
74 91Right-handed alpha
Helix 19
19
C
96 110Right-handed alpha
Helix 20
20
D
6 17Right-handed alpha
Helix 21
21
D
18 29Right-handed alpha
Helix 22
22
D
38 51Right-handed alpha
Helix 23
23
D
53 66Right-handed alpha
Helix 24
24
D
74 91Right-handed alpha
Helix 25
25
D
96 110Right-handed alpha
Helix 26
26
E
18 22Right-handed 310
Helix 27
27
E
45 58Right-handed alpha
Helix 28
28
F
18 22Right-handed 310
Helix 29
29
F
45 56Right-handed alpha
Helix 30
30
G
18 22Right-handed 310
Helix 31
31
G
45 56Right-handed alpha
Helix 32
32
H
18 22Right-handed 310
Helix 33
33
H
46 57Right-handed alpha
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There are 6 sheets in PDB entry 3ZVK. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
33 37parallel
Strand 3
A
2 5parallel
Strand 4
A
112 115parallel
Strand 5
A
128 131parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
B
33 37parallel
Strand 3
B
2 5parallel
Strand 4
B
112 115parallel
Strand 5
B
128 131parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 71first strand
Strand 2
C
33 37parallel
Strand 3
C
2 5parallel
Strand 4
C
112 115parallel
Strand 5
C
128 131parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 71first strand
Strand 2
D
33 37parallel
Strand 3
D
2 5parallel
Strand 4
D
112 115parallel
Strand 5
D
128 131parallel
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There are 9 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 9first strand
Strand 2
H
27 33anti-parallel
Strand 3
H
36 41anti-parallel
Strand 4
E
36 41anti-parallel
Strand 5
E
27 33anti-parallel
Strand 6
H
2 9anti-parallel
Strand 7
H
12 17anti-parallel
Strand 8
E
12 17anti-parallel
Strand 9
E
3 9anti-parallel
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There are 9 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 9first strand
Strand 2
G
27 33anti-parallel
Strand 3
G
36 41anti-parallel
Strand 4
F
36 41anti-parallel
Strand 5
F
27 33anti-parallel
Strand 6
G
3 9anti-parallel
Strand 7
G
12 17anti-parallel
Strand 8
F
12 17anti-parallel
Strand 9
F
3 9anti-parallel
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