Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZVS entry

There are 3 chains in PDB entry 3ZVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 158
B
 MET 1TYR 160
C
 MET 1ILE 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3ZVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 27Right-handed alpha
Helix 2
2
A
39 41Right-handed 310
Helix 3
3
A
52 59Right-handed alpha
Helix 4
4
A
97 100Right-handed 310
Helix 5
5
A
103 123Right-handed alpha
Helix 6
6
A
139 146Right-handed alpha
Helix 7
7
A
151 158Right-handed alpha
Helix 8
8
B
11 27Right-handed alpha
Helix 9
9
B
39 41Right-handed 310
Helix 10
10
B
52 59Right-handed alpha
Helix 11
11
B
97 100Right-handed 310
Helix 12
12
B
103 123Right-handed alpha
Helix 13
13
B
139 146Right-handed alpha
Helix 14
14
B
151 160Right-handed alpha
Helix 15
15
C
11 27Right-handed alpha
Helix 16
16
C
39 41Right-handed 310
Helix 17
17
C
52 59Right-handed alpha
Helix 18
18
C
97 100Right-handed 310
Helix 19
19
C
103 123Right-handed alpha
Helix 20
20
C
139 146Right-handed alpha
Helix 21
21
C
151 158Right-handed alpha
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There are 6 sheets in PDB entry 3ZVS. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
2 7parallel
Strand 3
A
65 69parallel
Strand 4
A
91 95parallel
Strand 5
A
83 85anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
49 51anti-parallel
Strand 3
A
73 74parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
2 8parallel
Strand 3
B
65 69parallel
Strand 4
B
91 95parallel
Strand 5
B
83 85anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
49 51anti-parallel
Strand 3
B
73 74parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 32first strand
Strand 2
C
2 8parallel
Strand 3
C
65 69parallel
Strand 4
C
91 95parallel
Strand 5
C
83 85anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 44first strand
Strand 2
C
49 51anti-parallel
Strand 3
C
73 74parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il