Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZVX entry

There are 2 chains in PDB entry 3ZVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8THR 249
B
 THR 9THR 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3ZVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
127 131Right-handed 310
Helix 2
2
A
211 215Right-handed alpha
Helix 3
3
B
127 131Right-handed 310
Helix 4
4
B
211 215Right-handed 310
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There are 10 sheets in PDB entry 3ZVX. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, AD, AE, AF, AG, BB, BC,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
234 248parallel
Strand 4
A
74 87anti-parallel
Strand 5
A
179 186anti-parallel
Strand 6
A
191 197anti-parallel
Strand 7
A
203 209anti-parallel
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There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
234 248parallel
Strand 4
A
10 16anti-parallel
Strand 5
B
10 16anti-parallel
Strand 6
B
234 247anti-parallel
Strand 7
B
74 87anti-parallel
Strand 8
B
179 186anti-parallel
Strand 9
B
191 197anti-parallel
Strand 10
B
203 209anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
234 248parallel
Strand 4
A
74 87anti-parallel
Strand 5
A
67 69anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
39 41parallel
Strand 3
B
234 247parallel
Strand 4
B
74 87anti-parallel
Strand 5
B
179 186anti-parallel
Strand 6
B
191 197anti-parallel
Strand 7
B
203 209anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
234 248parallel
Strand 4
A
10 16anti-parallel
Strand 5
B
10 16anti-parallel
Strand 6
B
234 247anti-parallel
Strand 7
B
39 41parallel
Strand 8
B
33 34parallel
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There are 8 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
234 248parallel
Strand 4
A
10 16anti-parallel
Strand 5
B
10 16anti-parallel
Strand 6
B
234 247anti-parallel
Strand 7
B
74 87anti-parallel
Strand 8
B
67 69anti-parallel
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There are 7 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
55 61anti-parallel
Strand 3
A
219 228anti-parallel
Strand 4
A
96 102anti-parallel
Strand 5
A
134 139anti-parallel
Strand 6
A
155 160anti-parallel
Strand 7
A
167 170anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
55 61anti-parallel
Strand 3
A
219 228anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
55 61anti-parallel
Strand 3
B
219 228anti-parallel
Strand 4
B
96 102anti-parallel
Strand 5
B
134 139anti-parallel
Strand 6
B
155 160anti-parallel
Strand 7
B
167 170anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
55 61anti-parallel
Strand 3
B
219 228anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il