Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZWF entry

There are 2 chains in PDB entry 3ZWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 3ILE 361
B
 MET 3ILE 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3ZWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 48Right-handed alpha
Helix 2
2
A
51 53Right-handed 310
Helix 3
3
A
64 68Right-handed 310
Helix 4
4
A
70 82Right-handed alpha
Helix 5
5
A
98 110Right-handed alpha
Helix 6
6
A
126 130Right-handed 310
Helix 7
7
A
260 266Right-handed alpha
Helix 8
8
A
279 281Right-handed 310
Helix 9
9
A
282 289Right-handed alpha
Helix 10
10
A
293 304Right-handed alpha
Helix 11
11
B
40 48Right-handed alpha
Helix 12
12
B
51 53Right-handed 310
Helix 13
13
B
64 68Right-handed 310
Helix 14
14
B
70 82Right-handed alpha
Helix 15
15
B
98 110Right-handed alpha
Helix 16
16
B
126 130Right-handed 310
Helix 17
17
B
260 266Right-handed alpha
Helix 18
18
B
279 281Right-handed 310
Helix 19
19
B
282 289Right-handed alpha
Helix 20
20
B
293 304Right-handed alpha
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There are 10 sheets in PDB entry 3ZWF. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
118 123parallel
Strand 3
A
91 96parallel
Strand 4
A
55 59parallel
Strand 5
A
31 35parallel
Strand 6
A
23 28anti-parallel
Strand 7
A
4 9anti-parallel
Strand 8
A
356 358anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 169first strand
Strand 2
A
173 181anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 257first strand
Strand 2
A
173 181parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
308 312parallel
Strand 3
A
271 275parallel
Strand 4
A
247 251parallel
Strand 5
A
186 193anti-parallel
Strand 6
A
173 181anti-parallel
Strand 7
A
256 257parallel
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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
308 312parallel
Strand 3
A
271 275parallel
Strand 4
A
247 251parallel
Strand 5
A
186 193anti-parallel
Strand 6
A
173 181anti-parallel
Strand 7
A
165 169anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 156first strand
Strand 2
B
118 123parallel
Strand 3
B
91 96parallel
Strand 4
B
55 59parallel
Strand 5
B
31 35parallel
Strand 6
B
23 28anti-parallel
Strand 7
B
4 9anti-parallel
Strand 8
B
356 358anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 169first strand
Strand 2
B
173 181anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 257first strand
Strand 2
B
173 181parallel
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There are 7 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
308 312parallel
Strand 3
B
271 275parallel
Strand 4
B
247 251parallel
Strand 5
B
186 193anti-parallel
Strand 6
B
173 181anti-parallel
Strand 7
B
256 257parallel
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There are 7 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
308 312parallel
Strand 3
B
271 275parallel
Strand 4
B
247 251parallel
Strand 5
B
186 193anti-parallel
Strand 6
B
173 181anti-parallel
Strand 7
B
165 169anti-parallel
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