Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZXG entry

There are 2 chains in PDB entry 3ZXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 5GLY 297
B
ALA 6LEU 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3ZXG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
92 96Right-handed alpha
Helix 2
2
A
240 243Right-handed 310
Helix 3
3
B
92 96Right-handed alpha
Helix 4
4
B
240 243Right-handed 310
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There are 20 sheets in PDB entry 3ZXG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
11 15first strand
Strand 2
A
147 156anti-parallel
Strand 3
A
69 80anti-parallel
Strand 4
A
85 91anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
11 15first strand
Strand 2
A
147 156anti-parallel
Strand 3
A
69 80anti-parallel
Strand 4
A
54 55anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
85 91first strand
Strand 2
A
69 80anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 28first strand
Strand 2
A
111 122anti-parallel
Strand 3
A
125 138anti-parallel
Strand 4
A
39 44anti-parallel
Strand 5
A
99 102anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 36first strand
Strand 2
A
105 106anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
208 213first strand
Strand 2
A
200 205anti-parallel
Strand 3
A
167 172anti-parallel
Strand 4
A
291 295anti-parallel
Strand 5
A
258 259anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
178 184first strand
Strand 2
A
187 193anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
223 226first strand
Strand 2
A
232 235anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
245 247first strand
Strand 2
A
261 263anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
269 273first strand
Strand 2
A
281 285anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
13 15first strand
Strand 2
B
147 156anti-parallel
Strand 3
B
69 80anti-parallel
Strand 4
B
86 91anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
13 15first strand
Strand 2
B
147 156anti-parallel
Strand 3
B
69 80anti-parallel
Strand 4
B
54 55anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
86 91first strand
Strand 2
B
69 80anti-parallel
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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
17 22first strand
Strand 2
B
116 122anti-parallel
Strand 3
B
125 128anti-parallel
Strand 4
B
34 44anti-parallel
Strand 5
B
99 107anti-parallel
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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
26 27first strand
Strand 2
B
111 114anti-parallel
Strand 3
B
135 138anti-parallel
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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
208 213first strand
Strand 2
B
200 205anti-parallel
Strand 3
B
167 172anti-parallel
Strand 4
B
291 295anti-parallel
Strand 5
B
258 259anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
178 184first strand
Strand 2
B
187 193anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
223 226first strand
Strand 2
B
232 235anti-parallel
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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
245 247first strand
Strand 2
B
261 263anti-parallel
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There are 2 strands in BJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
269 273first strand
Strand 2
B
281 285anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il