Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZXS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZXS entry

There are 3 chains in PDB entry 3ZXS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 1VAL 508
B
LEU 1VAL 508
C
LEU 1ALA 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 3ZXS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
16 21Right-handed alpha
Helix 2
2
A
34 40Right-handed alpha
Helix 3
3
A
44 65Right-handed alpha
Helix 4
4
A
82 95Right-handed alpha
Helix 5
5
A
106 116Right-handed alpha
Helix 6
6
A
131 140Right-handed alpha
Helix 7
7
A
146 159Right-handed alpha
Helix 8
8
A
169 171Right-handed 310
Helix 9
9
A
174 178Right-handed 310
Helix 10
10
A
197 211Right-handed alpha
Helix 11
11
A
226 241Right-handed alpha
Helix 12
12
A
242 245Right-handed 310
Helix 13
13
A
264 270Right-handed alpha
Helix 14
14
A
274 288Right-handed alpha
Helix 15
15
A
292 305Right-handed alpha
Helix 16
16
A
305 318Right-handed alpha
Helix 17
17
A
319 324Right-handed 310
Helix 18
18
A
334 339Right-handed 310
Helix 19
19
A
344 358Right-handed alpha
Helix 20
20
A
361 368Right-handed alpha
Helix 21
21
A
368 376Right-handed alpha
Helix 22
22
A
379 391Right-handed alpha
Helix 23
23
A
395 405Right-handed alpha
Helix 24
24
A
423 431Right-handed alpha
Helix 25
25
A
433 437Right-handed 310
Helix 26
26
A
450 463Right-handed alpha
Helix 27
27
A
463 468Right-handed alpha
Helix 28
28
A
470 472Right-handed 310
Helix 29
29
A
473 482Right-handed alpha
Helix 30
30
A
484 503Right-handed alpha
Helix 31
31
B
16 21Right-handed alpha
Helix 32
32
B
34 40Right-handed alpha
Helix 33
33
B
44 65Right-handed alpha
Helix 34
34
B
82 95Right-handed alpha
Helix 35
35
B
106 116Right-handed alpha
Helix 36
36
B
131 140Right-handed alpha
Helix 37
37
B
146 159Right-handed alpha
Helix 38
38
B
169 171Right-handed 310
Helix 39
39
B
174 178Right-handed 310
Helix 40
40
B
197 211Right-handed alpha
Helix 41
41
B
226 241Right-handed alpha
Helix 42
42
B
242 245Right-handed 310
Helix 43
43
B
264 270Right-handed alpha
Helix 44
44
B
274 288Right-handed alpha
Helix 45
45
B
292 305Right-handed alpha
Helix 46
46
B
305 318Right-handed alpha
Helix 47
47
B
320 324Right-handed 310
Helix 48
48
B
334 339Right-handed 310
Helix 49
49
B
344 358Right-handed alpha
Helix 50
50
B
361 368Right-handed alpha
Helix 51
51
B
368 376Right-handed alpha
Helix 52
52
B
379 391Right-handed alpha
Helix 53
53
B
395 405Right-handed alpha
Helix 54
54
B
424 431Right-handed alpha
Helix 55
55
B
433 437Right-handed 310
Helix 56
56
B
450 463Right-handed alpha
Helix 57
57
B
463 468Right-handed alpha
Helix 58
58
B
473 482Right-handed alpha
Helix 59
59
B
484 504Right-handed alpha
Helix 60
60
C
16 22Right-handed alpha
Helix 61
61
C
34 40Right-handed alpha
Helix 62
62
C
44 65Right-handed alpha
Helix 63
63
C
82 95Right-handed alpha
Helix 64
64
C
106 116Right-handed alpha
Helix 65
65
C
131 140Right-handed alpha
Helix 66
66
C
146 159Right-handed alpha
Helix 67
67
C
169 171Right-handed 310
Helix 68
68
C
174 178Right-handed 310
Helix 69
69
C
197 211Right-handed alpha
Helix 70
70
C
226 241Right-handed alpha
Helix 71
71
C
242 245Right-handed 310
Helix 72
72
C
264 270Right-handed alpha
Helix 73
73
C
274 288Right-handed alpha
Helix 74
74
C
292 305Right-handed alpha
Helix 75
75
C
305 318Right-handed alpha
Helix 76
76
C
320 324Right-handed 310
Helix 77
77
C
334 339Right-handed 310
Helix 78
78
C
344 358Right-handed alpha
Helix 79
79
C
361 368Right-handed alpha
Helix 80
80
C
368 376Right-handed alpha
Helix 81
81
C
379 391Right-handed alpha
Helix 82
82
C
395 405Right-handed alpha
Helix 83
83
C
423 430Right-handed alpha
Helix 84
84
C
433 437Right-handed 310
Helix 85
85
C
450 463Right-handed alpha
Helix 86
86
C
463 468Right-handed alpha
Helix 87
87
C
475 482Right-handed alpha
Helix 88
88
C
484 504Right-handed alpha
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There are 6 sheets in PDB entry 3ZXS. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 72first strand
Strand 2
A
28 32parallel
Strand 3
A
4 6parallel
Strand 4
A
99 102parallel
Strand 5
A
120 123parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
162 163first strand
Strand 2
A
166 167anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
69 72first strand
Strand 2
B
28 32parallel
Strand 3
B
4 6parallel
Strand 4
B
99 102parallel
Strand 5
B
120 123parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
162 163first strand
Strand 2
B
166 167anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
69 72first strand
Strand 2
C
28 32parallel
Strand 3
C
4 6parallel
Strand 4
C
99 102parallel
Strand 5
C
120 123parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
162 163first strand
Strand 2
C
166 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il