Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZY4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZY4 entry

There is 1 chain in PDB entry 3ZY4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 23ILE 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 3ZY4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 59Right-handed alpha
Helix 2
2
A
80 84Right-handed alpha
Helix 3
3
A
85 90Right-handed alpha
Helix 4
4
A
97 105Right-handed alpha
Helix 5
5
A
105 110Right-handed alpha
Helix 6
6
A
111 115Right-handed 310
Helix 7
7
A
142 150Right-handed alpha
Helix 8
8
A
173 182Right-handed alpha
Helix 9
9
A
202 212Right-handed 310
Helix 10
10
A
215 230Right-handed alpha
Helix 11
11
A
242 250Right-handed alpha
Helix 12
12
A
263 268Right-handed alpha
Helix 13
13
A
269 272Right-handed 310
Helix 14
14
A
277 282Right-handed alpha
Helix 15
15
A
284 300Right-handed alpha
Helix 16
16
A
313 322Right-handed alpha
Helix 17
17
A
323 325Right-handed 310
Helix 18
18
A
335 346Right-handed alpha
Helix 19
19
A
355 368Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3ZY4. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
61 63parallel
Strand 3
A
31 34parallel
Strand 4
A
189 192parallel
Strand 5
A
117 119parallel
Strand 6
A
157 159parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
76 79anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 329first strand
Strand 2
A
303 308parallel
Strand 3
A
234 239parallel
Strand 4
A
348 351parallel
Strand 5
A
375 377parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il