Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZYT entry

There is 1 chain in PDB entry 3ZYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 3ZYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 24Right-handed alpha
Helix 2
2
A
59 75Right-handed alpha
Helix 3
3
A
84 87Right-handed 310
Helix 4
4
A
88 93Right-handed 310
Helix 5
5
A
100 105Right-handed alpha
Helix 6
6
A
119 125Right-handed alpha
Helix 7
7
A
126 135Right-handed alpha
Helix 8
8
A
151 166Right-handed alpha
Helix 9
9
A
168 177Right-handed alpha
Helix 10
10
A
177 182Right-handed alpha
Helix 11
11
A
190 196Right-handed 310
Helix 12
12
A
215 221Right-handed alpha
Helix 13
13
A
227 233Right-handed 310
Helix 14
14
A
234 241Right-handed alpha
Helix 15
15
A
250 263Right-handed alpha
Helix 16
16
A
266 270Right-handed 310
Helix 17
17
A
276 285Right-handed alpha
Helix 18
18
A
334 336Right-handed 310
Helix 19
19
A
354 370Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3ZYT. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
38 45anti-parallel
Strand 3
A
29 35anti-parallel
Strand 4
A
338 344anti-parallel
Strand 5
A
329 333anti-parallel
Strand 6
A
320 323anti-parallel
Strand 7
A
306 307anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
248 249anti-parallel
Strand 3
A
185 186anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
298 301anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il