Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZYY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZYY entry

There are 2 chains in PDB entry 3ZYY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 GLU 3VAL 630
Y
 SER 108SER 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3ZYY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
22 31Right-handed alpha
Helix 2
2
X
65 71Right-handed alpha
Helix 3
3
X
102 109Right-handed alpha
Helix 4
4
X
143 157Right-handed alpha
Helix 5
5
X
169 177Right-handed alpha
Helix 6
6
X
239 243Right-handed 310
Helix 7
7
X
246 257Right-handed alpha
Helix 8
8
X
259 284Right-handed alpha
Helix 9
9
X
286 288Right-handed 310
Helix 10
10
X
298 307Right-handed alpha
Helix 11
11
X
310 314Right-handed 310
Helix 12
12
X
330 334Right-handed alpha
Helix 13
13
X
354 365Right-handed alpha
Helix 14
14
X
401 405Right-handed 310
Helix 15
15
X
426 429Right-handed 310
Helix 16
16
X
437 439Right-handed 310
Helix 17
17
X
445 459Right-handed alpha
Helix 18
18
X
490 494Right-handed 310
Helix 19
19
X
504 528Right-handed alpha
Helix 20
20
X
531 535Right-handed 310
Helix 21
21
X
550 556Right-handed alpha
Helix 22
22
X
563 565Right-handed 310
Helix 23
23
X
572 584Right-handed alpha
Helix 24
24
X
584 598Right-handed alpha
Helix 25
25
X
607 616Right-handed alpha
Helix 26
26
X
623 627Right-handed 310
Helix 27
27
Y
143 157Right-handed alpha
Helix 28
28
Y
164 168Right-handed 310
Helix 29
29
Y
169 177Right-handed alpha
Helix 30
30
Y
239 243Right-handed 310
Helix 31
31
Y
246 257Right-handed alpha
Helix 32
32
Y
259 284Right-handed alpha
Helix 33
33
Y
286 288Right-handed 310
Helix 34
34
Y
298 307Right-handed alpha
Helix 35
35
Y
310 314Right-handed 310
Helix 36
36
Y
330 334Right-handed alpha
Helix 37
37
Y
354 365Right-handed alpha
Helix 38
38
Y
366 369Right-handed 310
Helix 39
39
Y
426 429Right-handed 310
Helix 40
40
Y
437 439Right-handed 310
Helix 41
41
Y
445 459Right-handed alpha
Helix 42
42
Y
504 528Right-handed alpha
Helix 43
43
Y
531 535Right-handed 310
Helix 44
44
Y
550 556Right-handed alpha
Helix 45
45
Y
563 565Right-handed 310
Helix 46
46
Y
572 584Right-handed alpha
Helix 47
47
Y
584 597Right-handed alpha
Helix 48
48
Y
607 616Right-handed alpha
Helix 49
49
Y
623 627Right-handed 310
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There are 14 sheets in PDB entry 3ZYY. Click on sheet of interest to get list of strands forming it: XA, XB, XC, XD, XE, XF, XG, XH, YA, YB, YC, YD, YE, YF,

There are 5 strands in XA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
13 17first strand
Strand 2
X
4 9anti-parallel
Strand 3
X
85 88parallel
Strand 4
X
48 53anti-parallel
Strand 5
X
73 75anti-parallel
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There are 2 strands in XB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
56 58first strand
Strand 2
X
79 81anti-parallel
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There are 2 strands in XC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
110 112first strand
Strand 2
X
547 549anti-parallel
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There are 4 strands in XD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
126 132first strand
Strand 2
X
180 188anti-parallel
Strand 3
X
191 199anti-parallel
Strand 4
X
160 161parallel
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There are 6 strands in XE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
230 237first strand
Strand 2
X
217 224anti-parallel
Strand 3
X
207 213anti-parallel
Strand 4
X
290 297parallel
Strand 5
X
342 345parallel
Strand 6
X
328 329anti-parallel
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There are 6 strands in XF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
567 569first strand
Strand 2
X
537 541parallel
Strand 3
X
373 377parallel
Strand 4
X
381 387anti-parallel
Strand 5
X
392 398anti-parallel
Strand 6
X
599 600parallel
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There are 3 strands in XG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
431 435first strand
Strand 2
X
418 424anti-parallel
Strand 3
X
443 444parallel
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There are 3 strands in XH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
477 478first strand
Strand 2
X
485 489anti-parallel
Strand 3
X
500 503anti-parallel
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There are 2 strands in YA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
110 112first strand
Strand 2
Y
547 549anti-parallel
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There are 4 strands in YB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
126 132first strand
Strand 2
Y
180 188anti-parallel
Strand 3
Y
191 199anti-parallel
Strand 4
Y
160 161parallel
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There are 6 strands in YC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
230 237first strand
Strand 2
Y
217 224anti-parallel
Strand 3
Y
207 213anti-parallel
Strand 4
Y
290 297parallel
Strand 5
Y
342 345parallel
Strand 6
Y
328 329anti-parallel
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There are 6 strands in YD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
567 571first strand
Strand 2
Y
537 542parallel
Strand 3
Y
373 378parallel
Strand 4
Y
382 387anti-parallel
Strand 5
Y
392 397anti-parallel
Strand 6
Y
598 600parallel
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There are 3 strands in YE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
430 435first strand
Strand 2
Y
418 425anti-parallel
Strand 3
Y
443 444parallel
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There are 3 strands in YF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
477 478first strand
Strand 2
Y
485 489anti-parallel
Strand 3
Y
500 503anti-parallel
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