Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZZ1 entry

There is 1 chain in PDB entry 3ZZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 1ALA 713
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3ZZ1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
7 21Right-handed alpha
Helix 2
2
A
24 33Right-handed alpha
Helix 3
3
A
50 53Right-handed 310
Helix 4
4
A
77 84Right-handed alpha
Helix 5
5
A
86 104Right-handed alpha
Helix 6
6
A
125 129Right-handed 310
Helix 7
7
A
133 151Right-handed alpha
Helix 8
8
A
177 184Right-handed alpha
Helix 9
9
A
186 195Right-handed alpha
Helix 10
10
A
215 220Right-handed alpha
Helix 11
11
A
221 227Right-handed alpha
Helix 12
12
A
243 250Right-handed alpha
Helix 13
13
A
268 277Right-handed alpha
Helix 14
14
A
281 299Right-handed alpha
Helix 15
15
A
319 330Right-handed alpha
Helix 16
16
A
338 340Right-handed 310
Helix 17
17
A
354 357Right-handed 310
Helix 18
18
A
368 372Right-handed 310
Helix 19
19
A
394 405Right-handed alpha
Helix 20
20
A
417 426Right-handed alpha
Helix 21
21
A
461 473Right-handed alpha
Helix 22
22
A
488 493Right-handed alpha
Helix 23
23
A
506 508Right-handed 310
Helix 24
24
A
509 519Right-handed alpha
Helix 25
25
A
535 539Right-handed 310
Helix 26
26
A
558 565Right-handed alpha
Helix 27
27
A
674 677Right-handed 310
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There are 7 sheets in PDB entry 3ZZ1. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 45first strand
Strand 2
A
58 60anti-parallel
Strand 3
A
108 109parallel
Strand 4
A
154 160parallel
Strand 5
A
199 202parallel
Strand 6
A
232 235parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
210 211first strand
Strand 2
A
206 207anti-parallel
Strand 3
A
173 174parallel
Strand 4
A
548 549parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
332 336first strand
Strand 2
A
497 502anti-parallel
Strand 3
A
476 482parallel
Strand 4
A
430 437parallel
Strand 5
A
348 352parallel
Strand 6
A
409 413parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
582 591first strand
Strand 2
A
613 623anti-parallel
Strand 3
A
664 672anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
596 597first strand
Strand 2
A
685 688anti-parallel
Strand 3
A
678 680anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
602 603first strand
Strand 2
A
606 607anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
650 659first strand
Strand 2
A
629 638anti-parallel
Strand 3
A
691 698anti-parallel
Strand 4
A
704 712anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il