Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZZW entry

There are 2 chains in PDB entry 3ZZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 466GLY 750
B
 LYS 466GLY 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3ZZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
469 471Right-handed 310
Helix 2
2
A
514 531Right-handed alpha
Helix 3
3
A
560 568Right-handed alpha
Helix 4
4
A
588 609Right-handed alpha
Helix 5
5
A
617 619Right-handed 310
Helix 6
6
A
625 627Right-handed 310
Helix 7
7
A
641 645Right-handed 310
Helix 8
8
A
649 651Right-handed 310
Helix 9
9
A
655 659Right-handed 310
Helix 10
10
A
660 667Right-handed alpha
Helix 11
11
A
670 687Right-handed alpha
Helix 12
12
A
697 707Right-handed alpha
Helix 13
13
A
718 729Right-handed alpha
Helix 14
14
A
732 736Right-handed 310
Helix 15
15
A
738 748Right-handed alpha
Helix 16
16
B
469 471Right-handed 310
Helix 17
17
B
514 531Right-handed alpha
Helix 18
18
B
560 568Right-handed alpha
Helix 19
19
B
592 608Right-handed alpha
Helix 20
20
B
617 619Right-handed 310
Helix 21
21
B
625 627Right-handed 310
Helix 22
22
B
639 645Right-handed 310
Helix 23
23
B
649 651Right-handed 310
Helix 24
24
B
655 659Right-handed 310
Helix 25
25
B
660 667Right-handed alpha
Helix 26
26
B
670 687Right-handed alpha
Helix 27
27
B
697 707Right-handed alpha
Helix 28
28
B
718 729Right-handed alpha
Helix 29
29
B
732 736Right-handed 310
Helix 30
30
B
738 748Right-handed alpha
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There are 6 sheets in PDB entry 3ZZW. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 481first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
502 509anti-parallel
Strand 4
A
549 554anti-parallel
Strand 5
A
539 543anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 623first strand
Strand 2
A
629 631anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 648first strand
Strand 2
A
652 654anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 481first strand
Strand 2
B
486 493anti-parallel
Strand 3
B
501 509anti-parallel
Strand 4
B
549 554anti-parallel
Strand 5
B
539 543anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 623first strand
Strand 2
B
629 631anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
646 648first strand
Strand 2
B
652 654anti-parallel
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