Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZZZ entry

There are 4 chains in PDB entry 3ZZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 180ASP 284
B
 GLN 180ASP 284
C
 SER 682LEU 688
D
 SER 682LEU 688
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3ZZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
196 205Right-handed alpha
Helix 2
2
A
206 208Right-handed 310
Helix 3
3
A
230 242Right-handed alpha
Helix 4
4
B
196 205Right-handed alpha
Helix 5
5
B
206 208Right-handed 310
Helix 6
6
B
230 242Right-handed alpha
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There are 2 sheets in PDB entry 3ZZZ. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 274first strand
Strand 2
A
210 218anti-parallel
Strand 3
A
221 228anti-parallel
Strand 4
A
183 189anti-parallel
Strand 5
A
250 257anti-parallel
Strand 6
A
245 247anti-parallel
Strand 7
C
684 686parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 247first strand
Strand 2
B
250 257anti-parallel
Strand 3
B
183 189anti-parallel
Strand 4
B
222 228anti-parallel
Strand 5
B
210 217anti-parallel
Strand 6
B
272 274anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il