Analysis of interatomic Contacts of Structural Units in PDB entry:
43MU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 43MU entry

There are 3 chains in PDB entry 43MU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 70LYS 286
B
 VAL 13ARG 263
C
 GLY 1ILE 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 43MU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 80Right-handed alpha
Helix 2
AA2
A
113 121Right-handed alpha
Helix 3
AA3
A
170 174Right-handed 310
Helix 4
AA4
B
35 37Right-handed 310
Helix 5
AA5
B
84 88Right-handed 310
Helix 6
AA6
B
89 98Right-handed alpha
Helix 7
AA7
B
143 148Right-handed alpha
Helix 8
AA8
B
186 192Right-handed 310
Helix 9
AA9
C
43 48Right-handed alpha
Helix 10
AB1
C
64 69Right-handed 310
Helix 11
AB2
C
92 97Right-handed alpha
Helix 12
AB3
C
98 105Right-handed alpha
Helix 13
AB4
C
144 151Right-handed alpha
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There are 11 sheets in PDB entry 43MU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 91first strand
Strand 2
A
252 260anti-parallel
Strand 3
A
123 140anti-parallel
Strand 4
A
203 204anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 194first strand
Strand 2
A
123 140anti-parallel
Strand 3
A
263 270anti-parallel
Strand 4
C
39 40anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
A
238 243anti-parallel
Strand 3
A
152 158anti-parallel
Strand 4
A
180 184anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 17first strand
Strand 2
B
22 25anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
204 209parallel
Strand 3
B
99 112anti-parallel
Strand 4
B
246 262anti-parallel
Strand 5
B
64 65anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
204 209parallel
Strand 3
B
99 112anti-parallel
Strand 4
B
246 262anti-parallel
Strand 5
B
69 71anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
78 82anti-parallel
Strand 3
B
226 237anti-parallel
Strand 4
B
119 128anti-parallel
Strand 5
B
194 198anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
210 216anti-parallel
Strand 3
C
107 120anti-parallel
Strand 4
C
163 173anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
210 216anti-parallel
Strand 3
C
107 120anti-parallel
Strand 4
C
221 225anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 73first strand
Strand 2
C
207 208anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 86first strand
Strand 2
C
189 199anti-parallel
Strand 3
C
127 135anti-parallel
Strand 4
C
152 157anti-parallel
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