Analysis of interatomic Contacts of Structural Units in PDB entry:
43RH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 43RH entry

There are 7 chains in PDB entry 43RH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1TRP 274
B
 ILE 1MET 99
C
 GLY 1PRO 201
D
 ASP 1ASP 241
P
 HIS 1TRP 9
E
 GLY 1PRO 201
F
 ASP 1ALA 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 43RH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 53Right-handed 310
Helix 2
AA2
A
56 85Right-handed alpha
Helix 3
AA3
A
137 150Right-handed alpha
Helix 4
AA4
A
151 162Right-handed alpha
Helix 5
AA5
A
162 175Right-handed alpha
Helix 6
AA6
A
175 180Right-handed alpha
Helix 7
AA7
A
253 255Right-handed 310
Helix 8
AA8
C
65 67Right-handed 310
Helix 9
AA9
C
78 82Right-handed 310
Helix 10
AB1
C
93 97Right-handed 310
Helix 11
AB2
D
82 86Right-handed 310
Helix 12
AB3
D
113 117Right-handed 310
Helix 13
AB4
D
128 136Right-handed alpha
Helix 14
AB5
D
195 199Right-handed alpha
Helix 15
AB6
E
65 67Right-handed 310
Helix 16
AB7
E
78 82Right-handed 310
Helix 17
AB8
E
163 166Right-handed 310
Helix 18
AB9
F
82 86Right-handed 310
Helix 19
AC1
F
113 117Right-handed 310
Helix 20
AC2
F
128 136Right-handed alpha
Helix 21
AC3
F
195 200Right-handed alpha
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There are 22 sheets in PDB entry 43RH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
32 37anti-parallel
Strand 3
A
21 28anti-parallel
Strand 4
A
3 13anti-parallel
Strand 5
A
93 103anti-parallel
Strand 6
A
109 118anti-parallel
Strand 7
A
121 126anti-parallel
Strand 8
A
133 135anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 194first strand
Strand 2
A
198 208anti-parallel
Strand 3
A
241 250anti-parallel
Strand 4
A
234 235anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 219first strand
Strand 2
A
257 262anti-parallel
Strand 3
A
270 273anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
21 30anti-parallel
Strand 3
B
62 70anti-parallel
Strand 4
B
50 51anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
21 30anti-parallel
Strand 3
B
62 70anti-parallel
Strand 4
B
55 56anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 45first strand
Strand 2
B
36 41anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
91 94anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
69 74anti-parallel
Strand 4
C
59 64anti-parallel
Strand 5
C
52 55anti-parallel
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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 49first strand
Strand 2
C
32 37anti-parallel
Strand 3
C
83 89anti-parallel
Strand 4
C
104 109anti-parallel
Strand 5
C
10 14parallel
Strand 6
E
10 14anti-parallel
Strand 7
E
104 109parallel
Strand 8
E
83 89anti-parallel
Strand 9
E
32 37anti-parallel
Strand 10
E
44 47anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 100first strand
Strand 2
C
83 89anti-parallel
Strand 3
C
104 109anti-parallel
Strand 4
C
10 14parallel
Strand 5
E
10 14anti-parallel
Strand 6
E
104 109parallel
Strand 7
E
83 89anti-parallel
Strand 8
E
99 100anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
152 154first strand
Strand 2
C
167 176anti-parallel
Strand 3
C
131 138anti-parallel
Strand 4
C
118 124anti-parallel
Strand 5
D
121 126anti-parallel
Strand 6
D
137 147anti-parallel
Strand 7
D
185 194anti-parallel
Strand 8
D
167 169anti-parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 162first strand
Strand 2
C
167 176anti-parallel
Strand 3
C
131 138anti-parallel
Strand 4
C
118 124anti-parallel
Strand 5
D
121 126anti-parallel
Strand 6
D
137 147anti-parallel
Strand 7
D
185 194anti-parallel
Strand 8
D
174 175anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 7first strand
Strand 2
D
18 23anti-parallel
Strand 3
D
75 79anti-parallel
Strand 4
D
64 67anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 14first strand
Strand 2
D
106 111parallel
Strand 3
D
87 94anti-parallel
Strand 4
D
31 37anti-parallel
Strand 5
D
44 50anti-parallel
Strand 6
D
54 57anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 14first strand
Strand 2
D
106 111parallel
Strand 3
D
87 94anti-parallel
Strand 4
D
100 102anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
152 158first strand
Strand 2
D
204 211anti-parallel
Strand 3
D
231 237anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 7first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
69 74anti-parallel
Strand 4
E
59 64anti-parallel
Strand 5
E
52 56anti-parallel
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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
152 154first strand
Strand 2
E
167 176anti-parallel
Strand 3
E
131 138anti-parallel
Strand 4
E
118 124anti-parallel
Strand 5
F
121 126anti-parallel
Strand 6
F
137 147anti-parallel
Strand 7
F
185 194anti-parallel
Strand 8
F
167 169anti-parallel
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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
159 162first strand
Strand 2
E
167 176anti-parallel
Strand 3
E
131 138anti-parallel
Strand 4
E
118 124anti-parallel
Strand 5
F
121 126anti-parallel
Strand 6
F
137 147anti-parallel
Strand 7
F
185 194anti-parallel
Strand 8
F
174 175anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 7first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
73 79anti-parallel
Strand 4
F
64 70anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 13first strand
Strand 2
F
106 110parallel
Strand 3
F
88 93anti-parallel
Strand 4
F
32 37anti-parallel
Strand 5
F
44 49anti-parallel
Strand 6
F
54 57anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 13first strand
Strand 2
F
106 110parallel
Strand 3
F
88 93anti-parallel
Strand 4
F
101 102anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
161 163first strand
Strand 2
F
152 158anti-parallel
Strand 3
F
204 211anti-parallel
Strand 4
F
231 237anti-parallel
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