Analysis of interatomic Contacts of Structural Units in PDB entry:
4A2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4A2R entry

There is 1 chain in PDB entry 4A2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 2GLU 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4A2R. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 18Right-handed alpha
Helix 2
2
A
32 44Right-handed alpha
Helix 3
3
A
65 74Right-handed alpha
Helix 4
4
A
92 103Right-handed alpha
Helix 5
5
A
115 126Right-handed alpha
Helix 6
6
A
135 137Right-handed 310
Helix 7
7
A
138 152Right-handed alpha
Helix 8
8
A
162 172Right-handed alpha
Helix 9
9
A
190 201Right-handed alpha
Helix 10
10
A
215 225Right-handed alpha
Helix 11
11
A
233 238Right-handed 310
Helix 12
12
A
241 247Right-handed alpha
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There are 2 sheets in PDB entry 4A2R. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 52first strand
Strand 2
A
229 231parallel
Strand 3
A
206 210parallel
Strand 4
A
176 179parallel
Strand 5
A
157 160parallel
Strand 6
A
129 133parallel
Strand 7
A
107 110parallel
Strand 8
A
79 83parallel
Strand 9
A
48 52parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
182 183first strand
Strand 2
A
188 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il