Analysis of interatomic Contacts of Structural Units in PDB entry:
4A34

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4A34 entry

There are 20 chains in PDB entry 4A34 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 2	VAL 141
B	LEU 2	VAL 141
C	LEU 2	VAL 141
D	LEU 2	VAL 141
E	LEU 2	VAL 140
F	LEU 2	VAL 141
G	LEU 2	VAL 141
H	LEU 2	VAL 141
I	LEU 2	ARG 143
J	LEU 2	VAL 141
K	LEU 2	VAL 141
L	LEU 2	VAL 141
M	LEU 2	VAL 141
N	LEU 2	VAL 141
O	LEU 2	VAL 141
P	LEU 2	VAL 141
Q	LEU 2	VAL 141
R	LEU 2	VAL 141
S	LEU 2	VAL 141
T	LEU 2	VAL 141

There are119 helices in PDB entry 4A34. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	10	20	Right-handed alpha
Helix 2	2	A	34	39	Right-handed alpha
Helix 3	3	A	49	61	Right-handed alpha
Helix 4	4	A	84	94	Right-handed alpha
Helix 5	5	A	99	101	Right-handed 310
Helix 6	6	A	107	117	Right-handed alpha
Helix 7	7	B	10	20	Right-handed alpha
Helix 8	8	B	34	39	Right-handed alpha
Helix 9	9	B	49	61	Right-handed alpha
Helix 10	10	B	84	90	Right-handed alpha
Helix 11	11	B	93	97	Right-handed 310
Helix 12	12	B	99	101	Right-handed 310
Helix 13	13	B	107	117	Right-handed alpha
Helix 14	14	C	10	20	Right-handed alpha
Helix 15	15	C	34	39	Right-handed alpha
Helix 16	16	C	49	61	Right-handed alpha
Helix 17	17	C	84	96	Right-handed alpha
Helix 18	18	C	99	101	Right-handed 310
Helix 19	19	C	107	117	Right-handed alpha
Helix 20	20	D	10	20	Right-handed alpha
Helix 21	21	D	34	39	Right-handed alpha
Helix 22	22	D	49	61	Right-handed alpha
Helix 23	23	D	84	96	Right-handed alpha
Helix 24	24	D	99	101	Right-handed 310
Helix 25	25	D	107	118	Right-handed alpha
Helix 26	26	E	10	20	Right-handed alpha
Helix 27	27	E	34	39	Right-handed alpha
Helix 28	28	E	49	61	Right-handed alpha
Helix 29	29	E	84	94	Right-handed alpha
Helix 30	30	E	99	101	Right-handed 310
Helix 31	31	E	107	118	Right-handed alpha
Helix 32	32	F	10	20	Right-handed alpha
Helix 33	33	F	34	39	Right-handed alpha
Helix 34	34	F	49	61	Right-handed alpha
Helix 35	35	F	84	94	Right-handed alpha
Helix 36	36	F	99	101	Right-handed 310
Helix 37	37	F	108	118	Right-handed alpha
Helix 38	38	G	10	20	Right-handed alpha
Helix 39	39	G	34	39	Right-handed alpha
Helix 40	40	G	49	61	Right-handed alpha
Helix 41	41	G	84	94	Right-handed alpha
Helix 42	42	G	99	101	Right-handed 310
Helix 43	43	G	107	117	Right-handed alpha
Helix 44	44	H	10	20	Right-handed alpha
Helix 45	45	H	34	39	Right-handed alpha
Helix 46	46	H	49	61	Right-handed alpha
Helix 47	47	H	84	94	Right-handed alpha
Helix 48	48	H	99	101	Right-handed 310
Helix 49	49	H	107	117	Right-handed alpha
Helix 50	50	I	10	20	Right-handed alpha
Helix 51	51	I	34	39	Right-handed alpha
Helix 52	52	I	49	61	Right-handed alpha
Helix 53	53	I	84	94	Right-handed alpha
Helix 54	54	I	99	101	Right-handed 310
Helix 55	55	I	107	117	Right-handed alpha
Helix 56	56	J	10	20	Right-handed alpha
Helix 57	57	J	34	39	Right-handed alpha
Helix 58	58	J	49	61	Right-handed alpha
Helix 59	59	J	84	94	Right-handed alpha
Helix 60	60	J	99	101	Right-handed 310
Helix 61	61	J	107	118	Right-handed alpha
Helix 62	62	K	10	20	Right-handed alpha
Helix 63	63	K	34	39	Right-handed alpha
Helix 64	64	K	49	61	Right-handed alpha
Helix 65	65	K	84	94	Right-handed alpha
Helix 66	66	K	99	101	Right-handed 310
Helix 67	67	K	107	118	Right-handed alpha
Helix 68	68	L	10	20	Right-handed alpha
Helix 69	69	L	34	39	Right-handed alpha
Helix 70	70	L	49	61	Right-handed alpha
Helix 71	71	L	84	94	Right-handed alpha
Helix 72	72	L	107	118	Right-handed alpha
Helix 73	73	M	10	20	Right-handed alpha
Helix 74	74	M	34	39	Right-handed alpha
Helix 75	75	M	49	61	Right-handed alpha
Helix 76	76	M	84	94	Right-handed alpha
Helix 77	77	M	99	101	Right-handed 310
Helix 78	78	M	107	118	Right-handed alpha
Helix 79	79	N	10	20	Right-handed alpha
Helix 80	80	N	34	39	Right-handed alpha
Helix 81	81	N	49	61	Right-handed alpha
Helix 82	82	N	84	94	Right-handed alpha
Helix 83	83	N	99	101	Right-handed 310
Helix 84	84	N	107	117	Right-handed alpha
Helix 85	85	O	10	20	Right-handed alpha
Helix 86	86	O	34	39	Right-handed alpha
Helix 87	87	O	49	61	Right-handed alpha
Helix 88	88	O	84	94	Right-handed alpha
Helix 89	89	O	99	101	Right-handed 310
Helix 90	90	O	107	116	Right-handed alpha
Helix 91	91	P	10	20	Right-handed alpha
Helix 92	92	P	34	39	Right-handed alpha
Helix 93	93	P	49	61	Right-handed alpha
Helix 94	94	P	84	94	Right-handed alpha
Helix 95	95	P	99	101	Right-handed 310
Helix 96	96	P	107	118	Right-handed alpha
Helix 97	97	Q	10	20	Right-handed alpha
Helix 98	98	Q	34	39	Right-handed alpha
Helix 99	99	Q	49	61	Right-handed alpha
Helix 100	100	Q	84	94	Right-handed alpha
Helix 101	101	Q	99	101	Right-handed 310
Helix 102	102	Q	107	118	Right-handed alpha
Helix 103	103	R	10	20	Right-handed alpha
Helix 104	104	R	34	39	Right-handed alpha
Helix 105	105	R	49	61	Right-handed alpha
Helix 106	106	R	84	94	Right-handed alpha
Helix 107	107	R	99	101	Right-handed 310
Helix 108	108	R	107	118	Right-handed alpha
Helix 109	109	S	34	39	Right-handed alpha
Helix 110	110	S	49	61	Right-handed alpha
Helix 111	111	S	86	94	Right-handed alpha
Helix 112	112	S	99	101	Right-handed 310
Helix 113	113	S	107	118	Right-handed alpha
Helix 114	114	T	10	20	Right-handed alpha
Helix 115	115	T	34	39	Right-handed alpha
Helix 116	116	T	49	61	Right-handed alpha
Helix 117	117	T	84	96	Right-handed alpha
Helix 118	118	T	99	101	Right-handed 310
Helix 119	119	T	107	118	Right-handed alpha

There are 20 sheets in PDB entry 4A34. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA, IA, JA, KA, LA, MA, NA, OA, PA, QA, RA, SA, TA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	45	first strand
Strand 2	A	120	124	parallel
Strand 3	A	25	29	parallel
Strand 4	A	133	136	anti-parallel
Strand 5	A	71	74	anti-parallel
Strand 6	A	103	106	parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	45	first strand
Strand 2	B	120	124	parallel
Strand 3	B	25	29	parallel
Strand 4	B	133	136	anti-parallel
Strand 5	B	71	74	anti-parallel
Strand 6	B	103	106	parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	45	first strand
Strand 2	C	120	124	parallel
Strand 3	C	25	29	parallel
Strand 4	C	133	136	anti-parallel
Strand 5	C	71	74	anti-parallel
Strand 6	C	103	106	parallel

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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	45	first strand
Strand 2	D	120	124	parallel
Strand 3	D	25	29	parallel
Strand 4	D	133	136	anti-parallel
Strand 5	D	71	74	anti-parallel
Strand 6	D	103	106	parallel

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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	45	first strand
Strand 2	E	120	124	parallel
Strand 3	E	25	29	parallel
Strand 4	E	133	136	anti-parallel
Strand 5	E	71	74	anti-parallel
Strand 6	E	103	106	parallel

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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	42	45	first strand
Strand 2	F	120	124	parallel
Strand 3	F	25	29	parallel
Strand 4	F	133	136	anti-parallel
Strand 5	F	71	75	anti-parallel
Strand 6	F	103	107	parallel

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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	45	first strand
Strand 2	G	120	124	parallel
Strand 3	G	25	29	parallel
Strand 4	G	133	136	anti-parallel
Strand 5	G	71	74	anti-parallel
Strand 6	G	103	106	parallel

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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	42	45	first strand
Strand 2	H	120	124	parallel
Strand 3	H	25	29	parallel
Strand 4	H	133	136	anti-parallel
Strand 5	H	71	74	anti-parallel
Strand 6	H	103	106	parallel

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There are 6 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	42	45	first strand
Strand 2	I	120	124	parallel
Strand 3	I	25	29	parallel
Strand 4	I	133	136	anti-parallel
Strand 5	I	71	74	anti-parallel
Strand 6	I	103	106	parallel

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There are 6 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	42	44	first strand
Strand 2	J	120	123	parallel
Strand 3	J	25	29	parallel
Strand 4	J	133	136	anti-parallel
Strand 5	J	71	74	anti-parallel
Strand 6	J	103	106	parallel

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There are 6 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	44	first strand
Strand 2	K	120	123	parallel
Strand 3	K	25	29	parallel
Strand 4	K	133	136	anti-parallel
Strand 5	K	71	74	anti-parallel
Strand 6	K	103	106	parallel

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There are 6 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	42	45	first strand
Strand 2	L	120	124	parallel
Strand 3	L	25	29	parallel
Strand 4	L	133	136	anti-parallel
Strand 5	L	71	74	anti-parallel
Strand 6	L	103	106	parallel

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There are 6 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	42	45	first strand
Strand 2	M	120	124	parallel
Strand 3	M	25	29	parallel
Strand 4	M	133	136	anti-parallel
Strand 5	M	71	74	anti-parallel
Strand 6	M	103	106	parallel

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There are 6 strands in NA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	42	45	first strand
Strand 2	N	120	124	parallel
Strand 3	N	25	29	parallel
Strand 4	N	133	136	anti-parallel
Strand 5	N	71	74	anti-parallel
Strand 6	N	103	106	parallel

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There are 6 strands in OA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	42	45	first strand
Strand 2	O	120	124	parallel
Strand 3	O	25	29	parallel
Strand 4	O	133	136	anti-parallel
Strand 5	O	71	74	anti-parallel
Strand 6	O	103	106	parallel

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There are 6 strands in PA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	42	45	first strand
Strand 2	P	120	124	parallel
Strand 3	P	25	29	parallel
Strand 4	P	133	136	anti-parallel
Strand 5	P	71	74	anti-parallel
Strand 6	P	103	106	parallel

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There are 6 strands in QA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	42	45	first strand
Strand 2	Q	120	124	parallel
Strand 3	Q	25	29	parallel
Strand 4	Q	133	136	anti-parallel
Strand 5	Q	71	74	anti-parallel
Strand 6	Q	103	106	parallel

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There are 6 strands in RA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	42	45	first strand
Strand 2	R	120	124	parallel
Strand 3	R	25	29	parallel
Strand 4	R	133	136	anti-parallel
Strand 5	R	71	74	anti-parallel
Strand 6	R	103	106	parallel

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There are 6 strands in SA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	42	45	first strand
Strand 2	S	120	124	parallel
Strand 3	S	25	29	parallel
Strand 4	S	133	136	anti-parallel
Strand 5	S	71	74	anti-parallel
Strand 6	S	103	106	parallel

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There are 6 strands in TA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	42	45	first strand
Strand 2	T	120	124	parallel
Strand 3	T	25	29	parallel
Strand 4	T	133	136	anti-parallel
Strand 5	T	71	74	anti-parallel
Strand 6	T	103	106	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4A34

Analysis of interatomic Contacts of Structural Units in PDB entry:
4A34