Analysis of interatomic Contacts of Structural Units in PDB entry:
4A36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4A36 entry

There are 6 chains in PDB entry 4A36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 244ASP 793
B
 THR 243ASP 793
R
 G 1 A 19
S
 U 1 C 19
T
 G 1 G 18
U
 C 2 C 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 4A36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
247 259Right-handed alpha
Helix 2
2
A
272 286Right-handed alpha
Helix 3
3
A
302 318Right-handed alpha
Helix 4
4
A
331 335Right-handed 310
Helix 5
5
A
336 344Right-handed alpha
Helix 6
6
A
350 360Right-handed alpha
Helix 7
7
A
365 369Right-handed 310
Helix 8
8
A
376 380Right-handed 310
Helix 9
9
A
384 401Right-handed alpha
Helix 10
10
A
421 436Right-handed alpha
Helix 11
11
A
447 455Right-handed alpha
Helix 12
12
A
471 490Right-handed alpha
Helix 13
13
A
507 521Right-handed alpha
Helix 14
14
A
532 559Right-handed alpha
Helix 15
15
A
560 573Right-handed alpha
Helix 16
16
A
573 578Right-handed alpha
Helix 17
17
A
581 594Right-handed alpha
Helix 18
18
A
594 603Right-handed alpha
Helix 19
19
A
609 626Right-handed alpha
Helix 20
20
A
637 650Right-handed alpha
Helix 21
21
A
675 689Right-handed alpha
Helix 22
22
A
699 703Right-handed 310
Helix 23
23
A
723 728Right-handed alpha
Helix 24
24
A
729 732Right-handed 310
Helix 25
25
A
745 770Right-handed alpha
Helix 26
26
A
773 786Right-handed alpha
Helix 27
27
A
787 789Right-handed 310
Helix 28
28
B
247 259Right-handed alpha
Helix 29
29
B
272 286Right-handed alpha
Helix 30
30
B
302 318Right-handed alpha
Helix 31
31
B
331 335Right-handed 310
Helix 32
32
B
336 344Right-handed alpha
Helix 33
33
B
350 360Right-handed alpha
Helix 34
34
B
365 369Right-handed 310
Helix 35
35
B
376 380Right-handed 310
Helix 36
36
B
384 400Right-handed alpha
Helix 37
37
B
421 436Right-handed alpha
Helix 38
38
B
447 455Right-handed alpha
Helix 39
39
B
471 490Right-handed alpha
Helix 40
40
B
507 521Right-handed alpha
Helix 41
41
B
535 557Right-handed alpha
Helix 42
42
B
560 573Right-handed alpha
Helix 43
43
B
573 578Right-handed alpha
Helix 44
44
B
581 594Right-handed alpha
Helix 45
45
B
594 603Right-handed alpha
Helix 46
46
B
609 624Right-handed alpha
Helix 47
47
B
637 650Right-handed alpha
Helix 48
48
B
675 689Right-handed alpha
Helix 49
49
B
699 703Right-handed 310
Helix 50
50
B
723 728Right-handed alpha
Helix 51
51
B
729 732Right-handed 310
Helix 52
52
B
745 770Right-handed alpha
Helix 53
53
B
773 786Right-handed alpha
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There are 4 sheets in PDB entry 4A36. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 327first strand
Strand 2
A
346 349parallel
Strand 3
A
296 300parallel
Strand 4
A
371 375parallel
Strand 5
A
406 411parallel
Strand 6
A
263 266parallel
Strand 7
A
440 442parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
659 662first strand
Strand 2
A
694 697parallel
Strand 3
A
631 634parallel
Strand 4
A
712 716parallel
Strand 5
A
738 742parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 327first strand
Strand 2
B
346 349parallel
Strand 3
B
296 299parallel
Strand 4
B
371 374parallel
Strand 5
B
406 411parallel
Strand 6
B
263 266parallel
Strand 7
B
440 442parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
659 662first strand
Strand 2
B
694 697parallel
Strand 3
B
631 634parallel
Strand 4
B
712 716parallel
Strand 5
B
738 742parallel
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