Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4A3Q entry
There are 2 chains in PDB entry 4A3Q
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
|---|
A
|
SER 2 | LYS 382 |
B
|
SER 2 | LYS 382 |
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There are 22
helices in PDB entry 4A3Q. Click on helix of interest for
CSU analysis.
Helix
number
| Helix
ID | Chain
ID |
Initial
residue | Terminal
residue |
Helix class |
|---|
| Helix 1 |
1 | A
| 15 |
28 | Right-handed alpha |
| Helix 2 |
2 | A
| 47 |
57 | Right-handed alpha |
| Helix 3 |
3 | A
| 67 |
75 | Right-handed alpha |
| Helix 4 |
4 | A
| 93 |
99 | Right-handed alpha |
| Helix 5 |
5 | A
| 108 |
117 | Right-handed alpha |
| Helix 6 |
6 | A
| 144 |
156 | Right-handed alpha |
| Helix 7 |
7 | A
| 177 |
191 | Right-handed alpha |
| Helix 8 |
8 | A
| 204 |
209 | Right-handed alpha |
| Helix 9 |
9 | A
| 231 |
236 | Right-handed alpha |
| Helix 10 |
10 | A
| 342 |
349 | Right-handed alpha |
| Helix 11 |
11 | A
| 353 |
359 | Right-handed alpha |
| Helix 12 |
12 | B
| 15 |
28 | Right-handed alpha |
| Helix 13 |
13 | B
| 47 |
56 | Right-handed alpha |
| Helix 14 |
14 | B
| 67 |
76 | Right-handed alpha |
| Helix 15 |
15 | B
| 93 |
99 | Right-handed alpha |
| Helix 16 |
16 | B
| 108 |
117 | Right-handed alpha |
| Helix 17 |
17 | B
| 144 |
156 | Right-handed alpha |
| Helix 18 |
18 | B
| 179 |
191 | Right-handed alpha |
| Helix 19 |
19 | B
| 204 |
209 | Right-handed alpha |
| Helix 20 |
20 | B
| 231 |
236 | Right-handed alpha |
| Helix 21 |
21 | B
| 342 |
349 | Right-handed alpha |
| Helix 22 |
22 | B
| 353 |
359 | Right-handed alpha |
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There are
38 sheets in PDB entry 4A3Q. Click on sheet of
interest to get list of strands forming it:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
13,
14,
15,
16,
17,
18,
19,
20,
21,
22,
23,
24,
25,
26,
27,
28,
29,
30,
31,
32,
33,
34,
35,
36,
37,
38,
There are 1
strands in 1 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 9 |
14 | first strand |
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There are 1
strands in 2 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 33 |
34 | first strand |
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There are 1
strands in 3 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 36 |
37 | first strand |
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There are 1
strands in 4 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 61 |
64 | first strand |
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There are 1
strands in 5 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 81 |
84 | first strand |
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There are 1
strands in 6 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 101 |
105 | first strand |
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There are 1
strands in 7 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 126 |
131 | first strand |
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There are 1
strands in 8 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 160 |
166 | first strand |
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There are 1
strands in 9 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 198 |
202 | first strand |
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There are 1
strands in 10 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 217 |
218 | first strand |
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There are 1
strands in 11 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 245 |
251 | first strand |
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There are 1
strands in 12 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 253 |
255 | first strand |
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There are 1
strands in 13 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 276 |
280 | first strand |
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There are 1
strands in 14 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 295 |
299 | first strand |
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There are 1
strands in 15 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 302 |
306 | first strand |
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There are 1
strands in 16 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 315 |
319 | first strand |
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There are 1
strands in 17 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 327 |
332 | first strand |
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There are 1
strands in 18 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 366 |
370 | first strand |
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There are 1
strands in 19 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 373 |
377 | first strand |
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There are 1
strands in 20 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 9 |
14 | first strand |
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There are 1
strands in 21 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 33 |
34 | first strand |
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There are 1
strands in 22 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 36 |
37 | first strand |
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There are 1
strands in 23 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 61 |
64 | first strand |
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There are 1
strands in 24 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 81 |
84 | first strand |
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There are 1
strands in 25 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 103 |
105 | first strand |
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There are 1
strands in 26 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 126 |
131 | first strand |
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There are 1
strands in 27 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 160 |
166 | first strand |
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There are 1
strands in 28 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 198 |
200 | first strand |
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There are 1
strands in 29 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 217 |
218 | first strand |
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There are 1
strands in 30 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 245 |
251 | first strand |
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There are 1
strands in 31 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 253 |
256 | first strand |
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There are 1
strands in 32 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 276 |
280 | first strand |
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There are 1
strands in 33 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 295 |
299 | first strand |
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There are 1
strands in 34 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 302 |
306 | first strand |
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There are 1
strands in 35 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 315 |
318 | first strand |
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There are 1
strands in 36 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 327 |
332 | first strand |
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There are 1
strands in 37 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 366 |
370 | first strand |
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There are 1
strands in 38 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
B
| 373 |
377 | first strand |
Back to list of sheets
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Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il