Analysis of interatomic Contacts of Structural Units in PDB entry:
4A82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4A82 entry

There are 4 chains in PDB entry 4A82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 578
B
 MET 1LEU 578
C
 MET 1LEU 578
D
 MET 1LEU 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 4A82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 10Right-handed alpha
Helix 2
2
A
12 25Right-handed alpha
Helix 3
3
A
27 45Right-handed alpha
Helix 4
4
A
51 73Right-handed alpha
Helix 5
5
A
73 107Right-handed alpha
Helix 6
6
A
108 114Right-handed alpha
Helix 7
7
A
116 137Right-handed alpha
Helix 8
8
A
141 160Right-handed alpha
Helix 9
9
A
163 168Right-handed alpha
Helix 10
10
A
169 216Right-handed alpha
Helix 11
11
A
218 273Right-handed alpha
Helix 12
12
A
276 286Right-handed alpha
Helix 13
13
A
286 291Right-handed alpha
Helix 14
14
A
292 319Right-handed alpha
Helix 15
15
A
379 385Right-handed alpha
Helix 16
16
A
406 408Right-handed 310
Helix 17
17
A
409 416Right-handed alpha
Helix 18
18
A
430 436Right-handed alpha
Helix 19
19
A
437 439Right-handed 310
Helix 20
20
A
443 454Right-handed alpha
Helix 21
21
A
456 462Right-handed alpha
Helix 22
22
A
465 469Right-handed 310
Helix 23
23
A
472 476Right-handed 310
Helix 24
24
A
479 495Right-handed alpha
Helix 25
25
A
509 524Right-handed alpha
Helix 26
26
A
535 539Right-handed 310
Helix 27
27
A
558 565Right-handed alpha
Helix 28
28
A
567 574Right-handed alpha
Helix 29
29
B
1 10Right-handed alpha
Helix 30
30
B
12 25Right-handed alpha
Helix 31
31
B
27 44Right-handed alpha
Helix 32
32
B
54 59Right-handed alpha
Helix 33
33
B
61 73Right-handed alpha
Helix 34
34
B
73 107Right-handed alpha
Helix 35
35
B
108 114Right-handed alpha
Helix 36
36
B
116 137Right-handed alpha
Helix 37
37
B
141 160Right-handed alpha
Helix 38
38
B
160 169Right-handed alpha
Helix 39
39
B
169 216Right-handed alpha
Helix 40
40
B
218 271Right-handed alpha
Helix 41
41
B
278 291Right-handed alpha
Helix 42
42
B
292 319Right-handed alpha
Helix 43
43
B
379 385Right-handed alpha
Helix 44
44
B
406 408Right-handed 310
Helix 45
45
B
409 416Right-handed alpha
Helix 46
46
B
430 436Right-handed alpha
Helix 47
47
B
437 439Right-handed 310
Helix 48
48
B
443 454Right-handed alpha
Helix 49
49
B
456 462Right-handed alpha
Helix 50
50
B
465 469Right-handed 310
Helix 51
51
B
472 476Right-handed 310
Helix 52
52
B
479 495Right-handed alpha
Helix 53
53
B
509 524Right-handed alpha
Helix 54
54
B
535 539Right-handed 310
Helix 55
55
B
558 565Right-handed alpha
Helix 56
56
B
567 574Right-handed alpha
Helix 57
57
C
1 10Right-handed alpha
Helix 58
58
C
12 25Right-handed alpha
Helix 59
59
C
27 45Right-handed alpha
Helix 60
60
C
51 73Right-handed alpha
Helix 61
61
C
73 107Right-handed alpha
Helix 62
62
C
108 114Right-handed alpha
Helix 63
63
C
116 137Right-handed alpha
Helix 64
64
C
141 160Right-handed alpha
Helix 65
65
C
163 168Right-handed alpha
Helix 66
66
C
169 216Right-handed alpha
Helix 67
67
C
218 273Right-handed alpha
Helix 68
68
C
276 286Right-handed alpha
Helix 69
69
C
286 291Right-handed alpha
Helix 70
70
C
292 319Right-handed alpha
Helix 71
71
C
379 385Right-handed alpha
Helix 72
72
C
406 408Right-handed 310
Helix 73
73
C
409 416Right-handed alpha
Helix 74
74
C
430 436Right-handed alpha
Helix 75
75
C
437 439Right-handed 310
Helix 76
76
C
443 454Right-handed alpha
Helix 77
77
C
456 462Right-handed alpha
Helix 78
78
C
465 469Right-handed 310
Helix 79
79
C
472 476Right-handed 310
Helix 80
80
C
479 495Right-handed alpha
Helix 81
81
C
509 524Right-handed alpha
Helix 82
82
C
535 539Right-handed 310
Helix 83
83
C
558 565Right-handed alpha
Helix 84
84
C
567 574Right-handed alpha
Helix 85
85
D
1 10Right-handed alpha
Helix 86
86
D
12 25Right-handed alpha
Helix 87
87
D
27 44Right-handed alpha
Helix 88
88
D
54 59Right-handed alpha
Helix 89
89
D
61 73Right-handed alpha
Helix 90
90
D
73 107Right-handed alpha
Helix 91
91
D
108 114Right-handed alpha
Helix 92
92
D
116 137Right-handed alpha
Helix 93
93
D
141 160Right-handed alpha
Helix 94
94
D
160 169Right-handed alpha
Helix 95
95
D
169 216Right-handed alpha
Helix 96
96
D
218 271Right-handed alpha
Helix 97
97
D
278 291Right-handed alpha
Helix 98
98
D
292 319Right-handed alpha
Helix 99
99
D
379 385Right-handed alpha
Helix 100
100
D
406 408Right-handed 310
Helix 101
101
D
409 416Right-handed alpha
Helix 102
102
D
430 436Right-handed alpha
Helix 103
103
D
437 439Right-handed 310
Helix 104
104
D
443 454Right-handed alpha
Helix 105
105
D
456 462Right-handed alpha
Helix 106
106
D
465 469Right-handed 310
Helix 107
107
D
472 476Right-handed 310
Helix 108
108
D
479 495Right-handed alpha
Helix 109
109
D
509 524Right-handed alpha
Helix 110
110
D
535 539Right-handed 310
Helix 111
111
D
558 565Right-handed alpha
Helix 112
112
D
567 574Right-handed alpha
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There are 8 sheets in PDB entry 4A82. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 364first strand
Strand 2
A
340 347anti-parallel
Strand 3
A
395 400anti-parallel
Strand 4
A
403 404anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 420first strand
Strand 2
A
498 502parallel
Strand 3
A
528 532parallel
Strand 4
A
369 373parallel
Strand 5
A
544 549parallel
Strand 6
A
552 557anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 364first strand
Strand 2
B
340 347anti-parallel
Strand 3
B
395 400anti-parallel
Strand 4
B
403 404anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 420first strand
Strand 2
B
498 502parallel
Strand 3
B
528 532parallel
Strand 4
B
369 373parallel
Strand 5
B
544 549parallel
Strand 6
B
552 557anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
357 364first strand
Strand 2
C
340 347anti-parallel
Strand 3
C
395 400anti-parallel
Strand 4
C
403 404anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
417 420first strand
Strand 2
C
498 502parallel
Strand 3
C
528 532parallel
Strand 4
C
369 373parallel
Strand 5
C
544 549parallel
Strand 6
C
552 557anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
357 364first strand
Strand 2
D
340 347anti-parallel
Strand 3
D
395 400anti-parallel
Strand 4
D
403 404anti-parallel
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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
417 420first strand
Strand 2
D
498 502parallel
Strand 3
D
528 532parallel
Strand 4
D
369 373parallel
Strand 5
D
544 549parallel
Strand 6
D
552 557anti-parallel
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