Analysis of interatomic Contacts of Structural Units in PDB entry:
4A8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4A8E entry

There is 1 chain in PDB entry 4A8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 9VAL 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4A8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
26 44Right-handed alpha
Helix 3
3
A
48 63Right-handed alpha
Helix 4
4
A
65 84Right-handed alpha
Helix 5
5
A
85 92Right-handed alpha
Helix 6
6
A
106 116Right-handed alpha
Helix 7
7
A
119 132Right-handed alpha
Helix 8
8
A
135 142Right-handed alpha
Helix 9
9
A
170 183Right-handed alpha
Helix 10
10
A
204 219Right-handed alpha
Helix 11
11
A
224 239Right-handed alpha
Helix 12
12
A
242 251Right-handed alpha
Helix 13
13
A
264 273Right-handed alpha
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There are 2 sheets in PDB entry 4A8E. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
153 156anti-parallel
Strand 3
A
165 168anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
201 202anti-parallel
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