Analysis of interatomic Contacts of Structural Units in PDB entry:
4ACJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ACJ entry

There is 1 chain in PDB entry 4ACJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 635GLU 801
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4ACJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
643 652Right-handed alpha
Helix 2
2
A
655 659Right-handed 310
Helix 3
3
A
669 673Right-handed alpha
Helix 4
4
A
675 684Right-handed alpha
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There are 3 sheets in PDB entry 4ACJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
664 668first strand
Strand 2
A
789 799anti-parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
732 735first strand
Strand 2
A
723 726anti-parallel
Strand 3
A
701 706anti-parallel
Strand 4
A
690 696anti-parallel
Strand 5
A
789 799anti-parallel
Strand 6
A
770 773anti-parallel
Strand 7
A
762 765parallel
Strand 8
A
750 753anti-parallel
Strand 9
A
744 747parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
732 735first strand
Strand 2
A
723 726anti-parallel
Strand 3
A
701 706anti-parallel
Strand 4
A
690 696anti-parallel
Strand 5
A
789 799anti-parallel
Strand 6
A
664 668anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il