Analysis of interatomic Contacts of Structural Units in PDB entry:
4AD0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AD0 entry

There are 4 chains in PDB entry 4AD0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 37ALA 377
B
 THR 37SER 378
C
 THR 37SER 378
D
 THR 37ALA 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 4AD0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 116Right-handed alpha
Helix 2
2
A
125 130Right-handed 310
Helix 3
3
A
132 146Right-handed alpha
Helix 4
4
A
160 176Right-handed alpha
Helix 5
5
A
194 198Right-handed 310
Helix 6
6
A
199 208Right-handed alpha
Helix 7
7
A
230 232Right-handed 310
Helix 8
8
A
233 240Right-handed alpha
Helix 9
9
A
259 261Right-handed 310
Helix 10
10
A
262 273Right-handed alpha
Helix 11
11
A
294 298Right-handed 310
Helix 12
12
A
301 303Right-handed 310
Helix 13
13
A
304 317Right-handed alpha
Helix 14
14
A
358 377Right-handed alpha
Helix 15
15
B
52 57Right-handed alpha
Helix 16
16
B
101 116Right-handed alpha
Helix 17
17
B
125 130Right-handed 310
Helix 18
18
B
132 144Right-handed alpha
Helix 19
19
B
160 176Right-handed alpha
Helix 20
20
B
194 198Right-handed 310
Helix 21
21
B
199 208Right-handed alpha
Helix 22
22
B
230 233Right-handed 310
Helix 23
23
B
234 239Right-handed alpha
Helix 24
24
B
259 261Right-handed 310
Helix 25
25
B
262 273Right-handed alpha
Helix 26
26
B
294 298Right-handed 310
Helix 27
27
B
301 303Right-handed 310
Helix 28
28
B
304 318Right-handed alpha
Helix 29
29
B
358 377Right-handed alpha
Helix 30
30
C
52 57Right-handed alpha
Helix 31
31
C
101 116Right-handed alpha
Helix 32
32
C
125 130Right-handed 310
Helix 33
33
C
132 146Right-handed alpha
Helix 34
34
C
160 176Right-handed alpha
Helix 35
35
C
194 198Right-handed 310
Helix 36
36
C
199 208Right-handed alpha
Helix 37
37
C
230 233Right-handed 310
Helix 38
38
C
234 241Right-handed alpha
Helix 39
39
C
259 261Right-handed 310
Helix 40
40
C
262 273Right-handed alpha
Helix 41
41
C
301 303Right-handed 310
Helix 42
42
C
304 317Right-handed alpha
Helix 43
43
C
358 378Right-handed alpha
Helix 44
44
D
52 57Right-handed alpha
Helix 45
45
D
101 116Right-handed alpha
Helix 46
46
D
125 130Right-handed 310
Helix 47
47
D
132 146Right-handed alpha
Helix 48
48
D
160 176Right-handed alpha
Helix 49
49
D
194 198Right-handed 310
Helix 50
50
D
199 208Right-handed alpha
Helix 51
51
D
230 233Right-handed 310
Helix 52
52
D
234 240Right-handed alpha
Helix 53
53
D
259 261Right-handed 310
Helix 54
54
D
262 273Right-handed alpha
Helix 55
55
D
294 298Right-handed 310
Helix 56
56
D
301 303Right-handed 310
Helix 57
57
D
304 318Right-handed alpha
Helix 58
58
D
358 377Right-handed alpha
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There are 7 sheets in PDB entry 4AD0. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 278first strand
Strand 2
A
244 246parallel
Strand 3
A
223 227parallel
Strand 4
A
189 192parallel
Strand 5
A
148 153parallel
Strand 6
A
117 124parallel
Strand 7
A
39 46parallel
Strand 8
A
322 324parallel
Strand 9
A
280 281parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
339 340anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 278first strand
Strand 2
B
244 246parallel
Strand 3
B
223 227parallel
Strand 4
B
189 192parallel
Strand 5
B
148 153parallel
Strand 6
B
117 124parallel
Strand 7
B
39 46parallel
Strand 8
B
322 324parallel
Strand 9
B
280 281parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 92first strand
Strand 2
B
339 340anti-parallel
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There are 9 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
276 278first strand
Strand 2
C
244 246parallel
Strand 3
C
223 227parallel
Strand 4
C
189 192parallel
Strand 5
C
148 153parallel
Strand 6
C
117 124parallel
Strand 7
C
39 46parallel
Strand 8
C
322 324parallel
Strand 9
C
280 281parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 92first strand
Strand 2
C
339 340anti-parallel
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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
276 278first strand
Strand 2
D
244 246parallel
Strand 3
D
223 227parallel
Strand 4
D
189 192parallel
Strand 5
D
148 153parallel
Strand 6
D
117 124parallel
Strand 7
D
39 46parallel
Strand 8
D
322 324parallel
Strand 9
D
280 281parallel
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