Analysis of interatomic Contacts of Structural Units in PDB entry:
4ADC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ADC entry

There are 4 chains in PDB entry 4ADC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	SER 402
B	GLN 3	SER 402
C	GLN 3	SER 402
D	GLN 3	SER 402

There are 71 helices in PDB entry 4ADC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	14	Right-handed alpha
Helix 2	2	A	45	50	Right-handed alpha
Helix 3	3	A	57	69	Right-handed alpha
Helix 4	4	A	80	94	Right-handed alpha
Helix 5	5	A	104	125	Right-handed alpha
Helix 6	6	A	142	149	Right-handed alpha
Helix 7	7	A	151	155	Right-handed 310
Helix 8	8	A	155	159	Right-handed 310
Helix 9	9	A	172	180	Right-handed alpha
Helix 10	10	A	202	216	Right-handed alpha
Helix 11	11	A	236	242	Right-handed alpha
Helix 12	12	A	251	256	Right-handed 310
Helix 13	13	A	266	271	Right-handed alpha
Helix 14	14	A	285	300	Right-handed alpha
Helix 15	15	A	301	327	Right-handed alpha
Helix 16	16	A	350	361	Right-handed alpha
Helix 17	17	A	382	402	Right-handed alpha
Helix 18	18	B	6	14	Right-handed alpha
Helix 19	19	B	45	50	Right-handed alpha
Helix 20	20	B	57	71	Right-handed alpha
Helix 21	21	B	80	94	Right-handed alpha
Helix 22	22	B	104	125	Right-handed alpha
Helix 23	23	B	142	149	Right-handed alpha
Helix 24	24	B	151	156	Right-handed alpha
Helix 25	25	B	157	159	Right-handed 310
Helix 26	26	B	172	178	Right-handed alpha
Helix 27	27	B	202	217	Right-handed alpha
Helix 28	28	B	236	242	Right-handed alpha
Helix 29	29	B	251	256	Right-handed 310
Helix 30	30	B	266	271	Right-handed alpha
Helix 31	31	B	285	300	Right-handed alpha
Helix 32	32	B	301	327	Right-handed alpha
Helix 33	33	B	345	348	Right-handed 310
Helix 34	34	B	350	361	Right-handed alpha
Helix 35	35	B	382	402	Right-handed alpha
Helix 36	36	C	6	14	Right-handed alpha
Helix 37	37	C	45	50	Right-handed alpha
Helix 38	38	C	57	69	Right-handed alpha
Helix 39	39	C	80	94	Right-handed alpha
Helix 40	40	C	104	124	Right-handed alpha
Helix 41	41	C	142	149	Right-handed alpha
Helix 42	42	C	151	155	Right-handed 310
Helix 43	43	C	155	159	Right-handed 310
Helix 44	44	C	172	180	Right-handed alpha
Helix 45	45	C	202	217	Right-handed alpha
Helix 46	46	C	236	242	Right-handed alpha
Helix 47	47	C	251	256	Right-handed 310
Helix 48	48	C	266	271	Right-handed alpha
Helix 49	49	C	285	300	Right-handed alpha
Helix 50	50	C	301	327	Right-handed alpha
Helix 51	51	C	345	348	Right-handed 310
Helix 52	52	C	350	361	Right-handed alpha
Helix 53	53	C	382	401	Right-handed alpha
Helix 54	54	D	6	14	Right-handed alpha
Helix 55	55	D	45	50	Right-handed alpha
Helix 56	56	D	57	69	Right-handed alpha
Helix 57	57	D	80	94	Right-handed alpha
Helix 58	58	D	104	125	Right-handed alpha
Helix 59	59	D	142	149	Right-handed alpha
Helix 60	60	D	151	155	Right-handed 310
Helix 61	61	D	155	159	Right-handed 310
Helix 62	62	D	172	180	Right-handed alpha
Helix 63	63	D	202	217	Right-handed alpha
Helix 64	64	D	236	242	Right-handed alpha
Helix 65	65	D	251	256	Right-handed 310
Helix 66	66	D	266	271	Right-handed alpha
Helix 67	67	D	285	300	Right-handed alpha
Helix 68	68	D	301	327	Right-handed alpha
Helix 69	69	D	345	348	Right-handed 310
Helix 70	70	D	350	361	Right-handed alpha
Helix 71	71	D	382	401	Right-handed alpha

There are 16 sheets in PDB entry 4ADC. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	29	first strand
Strand 2	A	32	35	anti-parallel
Strand 3	A	40	43	anti-parallel
Strand 4	A	363	364	parallel

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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	102	first strand
Strand 2	A	261	265	anti-parallel
Strand 3	A	247	250	anti-parallel
Strand 4	A	219	223	parallel
Strand 5	A	184	189	parallel
Strand 6	A	130	134	parallel
Strand 7	A	165	168	parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	193	first strand
Strand 2	A	199	200	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	335	first strand
Strand 2	A	338	343	anti-parallel
Strand 3	A	372	375	anti-parallel
Strand 4	A	366	367	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	29	first strand
Strand 2	B	32	35	anti-parallel
Strand 3	B	40	43	anti-parallel
Strand 4	B	363	364	parallel

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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	102	first strand
Strand 2	B	261	265	anti-parallel
Strand 3	B	247	250	anti-parallel
Strand 4	B	219	223	parallel
Strand 5	B	184	189	parallel
Strand 6	B	130	134	parallel
Strand 7	B	165	168	parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	193	first strand
Strand 2	B	199	200	anti-parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	335	first strand
Strand 2	B	338	343	anti-parallel
Strand 3	B	372	375	anti-parallel
Strand 4	B	366	367	anti-parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	29	first strand
Strand 2	C	32	35	anti-parallel
Strand 3	C	40	43	anti-parallel
Strand 4	C	363	364	parallel

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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	102	first strand
Strand 2	C	261	265	anti-parallel
Strand 3	C	247	250	anti-parallel
Strand 4	C	219	223	parallel
Strand 5	C	184	189	parallel
Strand 6	C	130	134	parallel
Strand 7	C	165	168	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	193	first strand
Strand 2	C	199	200	anti-parallel

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There are 4 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	335	first strand
Strand 2	C	338	343	anti-parallel
Strand 3	C	372	375	anti-parallel
Strand 4	C	366	367	anti-parallel

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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	29	first strand
Strand 2	D	32	35	anti-parallel
Strand 3	D	40	43	anti-parallel
Strand 4	D	363	364	parallel

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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	102	first strand
Strand 2	D	261	265	anti-parallel
Strand 3	D	247	250	anti-parallel
Strand 4	D	219	223	parallel
Strand 5	D	184	189	parallel
Strand 6	D	130	134	parallel
Strand 7	D	165	168	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	193	first strand
Strand 2	D	199	200	anti-parallel

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There are 4 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	329	335	first strand
Strand 2	D	338	343	anti-parallel
Strand 3	D	372	375	anti-parallel
Strand 4	D	366	367	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ADC

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ADC