Analysis of interatomic Contacts of Structural Units in PDB entry:
4ADQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ADQ entry

There are 8 chains in PDB entry 4ADQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 21LEU 219
B
 VAL 21LEU 219
C
 VAL 21SER 220
D
 VAL 21SER 220
E
 SER 4SER 147
F
 GLU 5CYS 146
G
 SER 4CYS 146
H
 GLU 5CYS 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 4ADQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 74Right-handed 310
Helix 2
2
A
95 99Right-handed 310
Helix 3
3
B
95 99Right-handed 310
Helix 4
4
C
95 99Right-handed 310
Helix 5
5
D
95 99Right-handed 310
Helix 6
6
E
4 10Right-handed 310
Helix 7
7
E
12 25Right-handed alpha
Helix 8
8
E
45 64Right-handed alpha
Helix 9
9
E
71 88Right-handed alpha
Helix 10
10
E
89 91Right-handed 310
Helix 11
11
E
109 131Right-handed alpha
Helix 12
12
E
133 137Right-handed 310
Helix 13
13
E
139 145Right-handed alpha
Helix 14
14
F
5 10Right-handed 310
Helix 15
15
F
12 25Right-handed alpha
Helix 16
16
F
45 64Right-handed alpha
Helix 17
17
F
71 88Right-handed alpha
Helix 18
18
F
89 91Right-handed 310
Helix 19
19
F
109 131Right-handed alpha
Helix 20
20
F
133 137Right-handed 310
Helix 21
21
F
139 145Right-handed alpha
Helix 22
22
G
4 10Right-handed 310
Helix 23
23
G
12 25Right-handed alpha
Helix 24
24
G
45 64Right-handed alpha
Helix 25
25
G
71 88Right-handed alpha
Helix 26
26
G
89 91Right-handed 310
Helix 27
27
G
109 131Right-handed alpha
Helix 28
28
G
133 137Right-handed 310
Helix 29
29
G
139 145Right-handed alpha
Helix 30
30
H
5 10Right-handed 310
Helix 31
31
H
12 25Right-handed alpha
Helix 32
32
H
45 64Right-handed alpha
Helix 33
33
H
71 88Right-handed alpha
Helix 34
34
H
89 91Right-handed 310
Helix 35
35
H
109 131Right-handed alpha
Helix 36
36
H
133 137Right-handed 310
Helix 37
37
H
139 145Right-handed alpha
Back to top of page

There are 28 sheets in PDB entry 4ADQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE, A, CF, CG, DB, CH, CI, CJ, C, DD, EA, FA, GA, HA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
111 133parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 70first strand
Strand 2
A
56 64anti-parallel
Strand 3
A
45 52anti-parallel
Strand 4
A
100 108anti-parallel
Strand 5
A
111 133anti-parallel
Strand 6
A
142 151anti-parallel
Strand 7
A
183 191anti-parallel
Strand 8
A
176 177anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 70first strand
Strand 2
A
56 64anti-parallel
Strand 3
A
45 52anti-parallel
Strand 4
A
100 108anti-parallel
Strand 5
A
111 133anti-parallel
Strand 6
A
22 24parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 34first strand
Strand 2
A
86 91anti-parallel
Strand 3
A
78 83anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 158first strand
Strand 2
A
199 205anti-parallel
Strand 3
A
208 214anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
111 133parallel
Back to list of sheets
Back to top of page

There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 70first strand
Strand 2
B
56 64anti-parallel
Strand 3
B
45 52anti-parallel
Strand 4
B
100 108anti-parallel
Strand 5
B
111 133anti-parallel
Strand 6
B
142 151anti-parallel
Strand 7
B
183 191anti-parallel
Strand 8
B
176 177anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 70first strand
Strand 2
B
56 64anti-parallel
Strand 3
B
45 52anti-parallel
Strand 4
B
100 108anti-parallel
Strand 5
B
111 133anti-parallel
Strand 6
B
22 24parallel
Back to list of sheets
Back to top of page

There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 34first strand
Strand 2
B
86 91anti-parallel
Strand 3
B
78 83anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 158first strand
Strand 2
B
199 205anti-parallel
Strand 3
B
208 214anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
111 133parallel
Back to list of sheets
Back to top of page

There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 70first strand
Strand 2
C
56 64anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
142 151anti-parallel
Strand 4
C
111 133anti-parallel
Strand 5
D
111 133anti-parallel
Strand 6
D
142 151anti-parallel
Strand 7
D
183 191parallel
Strand 8
D
176 177anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
142 151anti-parallel
Strand 4
C
111 133anti-parallel
Strand 5
C
100 108parallel
Strand 6
C
45 52parallel
Strand 7
C
56 64anti-parallel
Strand 8
C
67 70anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
142 151anti-parallel
Strand 4
C
111 133anti-parallel
Strand 5
C
22 24parallel
Back to list of sheets
Back to top of page

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 24first strand
Strand 2
D
111 133anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
142 151anti-parallel
Strand 4
C
111 133anti-parallel
Strand 5
D
111 133anti-parallel
Strand 6
D
100 108anti-parallel
Strand 7
D
45 52anti-parallel
Strand 8
D
56 64anti-parallel
Strand 9
D
67 70anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in CG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
142 151anti-parallel
Strand 4
C
111 133anti-parallel
Strand 5
D
111 133anti-parallel
Strand 6
D
22 24anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 70first strand
Strand 2
D
56 64anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in CH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
142 151anti-parallel
Strand 4
C
111 133anti-parallel
Strand 5
C
100 108parallel
Strand 6
C
45 52parallel
Strand 7
C
56 64anti-parallel
Strand 8
D
56 64anti-parallel
Strand 9
D
67 70anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in CI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 34first strand
Strand 2
C
86 91anti-parallel
Strand 3
C
78 83anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in CJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 158first strand
Strand 2
C
199 205anti-parallel
Strand 3
C
208 214anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 34first strand
Strand 2
D
86 91anti-parallel
Strand 3
D
78 83anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 158first strand
Strand 2
D
199 205anti-parallel
Strand 3
D
208 214anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 38first strand
Strand 2
E
103 108anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
33 38first strand
Strand 2
F
103 108anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
33 38first strand
Strand 2
G
103 108anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
33 38first strand
Strand 2
H
103 108anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il