Analysis of interatomic Contacts of Structural Units in PDB entry:
4ADT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ADT entry

There are 2 chains in PDB entry 4ADT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6LYS 283
B
 CYS 17LYS 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4ADT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 19Right-handed alpha
Helix 2
2
A
30 41Right-handed alpha
Helix 3
3
A
66 75Right-handed alpha
Helix 4
4
A
89 99Right-handed alpha
Helix 5
5
A
120 124Right-handed 310
Helix 6
6
A
134 145Right-handed alpha
Helix 7
7
A
160 180Right-handed alpha
Helix 8
8
A
184 193Right-handed alpha
Helix 9
9
A
195 206Right-handed alpha
Helix 10
10
A
220 230Right-handed alpha
Helix 11
11
A
238 243Right-handed alpha
Helix 12
12
A
246 260Right-handed alpha
Helix 13
13
A
263 270Right-handed alpha
Helix 14
14
B
17 21Right-handed 310
Helix 15
15
B
30 41Right-handed alpha
Helix 16
16
B
66 75Right-handed alpha
Helix 17
17
B
89 99Right-handed alpha
Helix 18
18
B
120 124Right-handed 310
Helix 19
19
B
134 144Right-handed alpha
Helix 20
20
B
160 180Right-handed alpha
Helix 21
21
B
184 193Right-handed alpha
Helix 22
22
B
195 206Right-handed alpha
Helix 23
23
B
220 230Right-handed alpha
Helix 24
24
B
238 243Right-handed alpha
Helix 25
25
B
246 260Right-handed alpha
Helix 26
26
B
263 270Right-handed alpha
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There are 2 sheets in PDB entry 4ADT. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
235 237parallel
Strand 3
A
211 215parallel
Strand 4
A
148 151parallel
Strand 5
A
128 132parallel
Strand 6
A
103 107parallel
Strand 7
A
80 86parallel
Strand 8
A
44 47parallel
Strand 9
A
24 28parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 28first strand
Strand 2
B
234 237parallel
Strand 3
B
211 215parallel
Strand 4
B
148 151parallel
Strand 5
B
128 132parallel
Strand 6
B
103 107parallel
Strand 7
B
80 86parallel
Strand 8
B
44 47parallel
Strand 9
B
23 28parallel
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