Analysis of interatomic Contacts of Structural Units in PDB entry:
4ADY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ADY entry

There are 2 chains in PDB entry 4ADY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ASP 925
B
 ARG 58ASN 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 4ADY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
17 41Right-handed alpha
Helix 3
3
A
42 51Right-handed alpha
Helix 4
4
A
57 73Right-handed alpha
Helix 5
5
A
74 86Right-handed alpha
Helix 6
6
A
87 89Right-handed 310
Helix 7
7
A
95 120Right-handed alpha
Helix 8
8
A
122 126Right-handed 310
Helix 9
9
A
130 148Right-handed alpha
Helix 10
10
A
149 160Right-handed alpha
Helix 11
11
A
162 174Right-handed alpha
Helix 12
12
A
178 196Right-handed alpha
Helix 13
13
A
199 217Right-handed alpha
Helix 14
14
A
221 233Right-handed alpha
Helix 15
15
A
234 247Right-handed alpha
Helix 16
16
A
250 265Right-handed alpha
Helix 17
17
A
266 280Right-handed alpha
Helix 18
18
A
283 290Right-handed alpha
Helix 19
19
A
292 307Right-handed alpha
Helix 20
20
A
310 321Right-handed alpha
Helix 21
21
A
325 340Right-handed alpha
Helix 22
22
A
346 352Right-handed alpha
Helix 23
23
A
352 359Right-handed alpha
Helix 24
24
A
361 375Right-handed alpha
Helix 25
25
A
381 387Right-handed alpha
Helix 26
26
A
397 412Right-handed alpha
Helix 27
27
A
416 431Right-handed alpha
Helix 28
28
A
436 454Right-handed alpha
Helix 29
29
A
459 472Right-handed alpha
Helix 30
30
A
474 490Right-handed alpha
Helix 31
31
A
494 508Right-handed alpha
Helix 32
32
A
510 525Right-handed alpha
Helix 33
33
A
528 531Right-handed 310
Helix 34
34
A
532 542Right-handed alpha
Helix 35
35
A
544 559Right-handed alpha
Helix 36
36
A
564 578Right-handed alpha
Helix 37
37
A
580 595Right-handed alpha
Helix 38
38
A
601 606Right-handed alpha
Helix 39
39
A
608 612Right-handed 310
Helix 40
40
A
614 629Right-handed alpha
Helix 41
41
A
634 646Right-handed alpha
Helix 42
42
A
649 664Right-handed alpha
Helix 43
43
A
674 688Right-handed alpha
Helix 44
44
A
692 707Right-handed alpha
Helix 45
45
A
708 711Right-handed 310
Helix 46
46
A
726 737Right-handed alpha
Helix 47
47
A
742 751Right-handed 310
Helix 48
48
A
877 880Right-handed 310
Helix 49
49
A
919 925Right-handed alpha
Helix 50
50
B
58 73Right-handed alpha
Helix 51
51
B
74 86Right-handed alpha
Helix 52
52
B
87 89Right-handed 310
Helix 53
53
B
95 120Right-handed alpha
Helix 54
54
B
122 126Right-handed 310
Helix 55
55
B
130 147Right-handed alpha
Helix 56
56
B
149 160Right-handed alpha
Helix 57
57
B
162 174Right-handed alpha
Helix 58
58
B
178 197Right-handed alpha
Helix 59
59
B
199 217Right-handed alpha
Helix 60
60
B
221 233Right-handed alpha
Helix 61
61
B
234 249Right-handed alpha
Helix 62
62
B
250 265Right-handed alpha
Helix 63
63
B
266 280Right-handed alpha
Helix 64
64
B
283 291Right-handed alpha
Helix 65
65
B
292 307Right-handed alpha
Helix 66
66
B
310 321Right-handed alpha
Helix 67
67
B
325 340Right-handed alpha
Helix 68
68
B
346 352Right-handed alpha
Helix 69
69
B
352 359Right-handed alpha
Helix 70
70
B
361 375Right-handed alpha
Helix 71
71
B
381 387Right-handed alpha
Helix 72
72
B
397 412Right-handed alpha
Helix 73
73
B
416 431Right-handed alpha
Helix 74
74
B
436 454Right-handed alpha
Helix 75
75
B
459 471Right-handed alpha
Helix 76
76
B
474 489Right-handed alpha
Helix 77
77
B
494 508Right-handed alpha
Helix 78
78
B
510 525Right-handed alpha
Helix 79
79
B
528 531Right-handed 310
Helix 80
80
B
532 541Right-handed alpha
Helix 81
81
B
544 559Right-handed alpha
Helix 82
82
B
564 578Right-handed alpha
Helix 83
83
B
580 595Right-handed alpha
Helix 84
84
B
598 600Right-handed 310
Helix 85
85
B
601 607Right-handed alpha
Helix 86
86
B
608 612Right-handed 310
Helix 87
87
B
614 629Right-handed alpha
Helix 88
88
B
634 646Right-handed alpha
Helix 89
89
B
649 665Right-handed alpha
Helix 90
90
B
674 687Right-handed alpha
Helix 91
91
B
692 707Right-handed alpha
Helix 92
92
B
708 711Right-handed 310
Helix 93
93
B
726 737Right-handed alpha
Helix 94
94
B
742 751Right-handed 310
Helix 95
95
B
877 880Right-handed 310
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There are 8 sheets in PDB entry 4ADY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 715first strand
Strand 2
A
753 755anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 762first strand
Strand 2
A
901 907parallel
Strand 3
A
890 892anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 769first strand
Strand 2
A
916 917anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
866 869first strand
Strand 2
A
772 775anti-parallel
Strand 3
A
882 883anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
713 715first strand
Strand 2
B
753 755anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
758 762first strand
Strand 2
B
901 907parallel
Strand 3
B
890 892anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
768 769first strand
Strand 2
B
916 917anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
866 869first strand
Strand 2
B
772 775anti-parallel
Strand 3
B
882 883anti-parallel
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