Analysis of interatomic Contacts of Structural Units in PDB entry:
4AG3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AG3 entry

There are 4 chains in PDB entry 4AG3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -6SER 247
B
 MET 1SER 247
C
 ASN -5SER 247
D
 MET 1SER 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 4AG3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
38 52Right-handed alpha
Helix 3
3
A
65 80Right-handed alpha
Helix 4
4
A
97 101Right-handed 310
Helix 5
5
A
102 114Right-handed alpha
Helix 6
6
A
114 132Right-handed alpha
Helix 7
7
A
141 147Right-handed alpha
Helix 8
8
A
151 173Right-handed alpha
Helix 9
9
A
189 194Right-handed alpha
Helix 10
10
A
196 205Right-handed alpha
Helix 11
11
A
214 226Right-handed alpha
Helix 12
12
A
227 231Right-handed 310
Helix 13
13
B
15 28Right-handed alpha
Helix 14
14
B
38 52Right-handed alpha
Helix 15
15
B
65 80Right-handed alpha
Helix 16
16
B
97 101Right-handed 310
Helix 17
17
B
102 114Right-handed alpha
Helix 18
18
B
114 132Right-handed alpha
Helix 19
19
B
141 147Right-handed alpha
Helix 20
20
B
151 173Right-handed alpha
Helix 21
21
B
189 194Right-handed alpha
Helix 22
22
B
196 205Right-handed alpha
Helix 23
23
B
214 227Right-handed alpha
Helix 24
24
B
228 231Right-handed 310
Helix 25
25
C
15 28Right-handed alpha
Helix 26
26
C
38 52Right-handed alpha
Helix 27
27
C
65 80Right-handed alpha
Helix 28
28
C
97 101Right-handed 310
Helix 29
29
C
102 114Right-handed alpha
Helix 30
30
C
114 132Right-handed alpha
Helix 31
31
C
141 147Right-handed alpha
Helix 32
32
C
151 173Right-handed alpha
Helix 33
33
C
189 194Right-handed alpha
Helix 34
34
C
196 205Right-handed alpha
Helix 35
35
C
214 226Right-handed alpha
Helix 36
36
C
227 231Right-handed 310
Helix 37
37
D
15 28Right-handed alpha
Helix 38
38
D
38 52Right-handed alpha
Helix 39
39
D
65 80Right-handed alpha
Helix 40
40
D
97 101Right-handed 310
Helix 41
41
D
102 114Right-handed alpha
Helix 42
42
D
114 132Right-handed alpha
Helix 43
43
D
141 147Right-handed alpha
Helix 44
44
D
151 173Right-handed alpha
Helix 45
45
D
198 205Right-handed alpha
Helix 46
46
D
214 227Right-handed alpha
Helix 47
47
D
228 231Right-handed 310
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There are 4 sheets in PDB entry 4AG3. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
31 36parallel
Strand 3
A
7 10parallel
Strand 4
A
85 88parallel
Strand 5
A
134 139parallel
Strand 6
A
177 184parallel
Strand 7
A
237 240parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
31 36parallel
Strand 3
B
7 10parallel
Strand 4
B
83 88parallel
Strand 5
B
134 139parallel
Strand 6
B
177 184parallel
Strand 7
B
237 240parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 60first strand
Strand 2
C
31 36parallel
Strand 3
C
7 10parallel
Strand 4
C
85 88parallel
Strand 5
C
134 139parallel
Strand 6
C
177 184parallel
Strand 7
C
237 240parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 60first strand
Strand 2
D
31 36parallel
Strand 3
D
7 10parallel
Strand 4
D
83 88parallel
Strand 5
D
134 139parallel
Strand 6
D
177 184parallel
Strand 7
D
237 240parallel
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