Analysis of interatomic Contacts of Structural Units in PDB entry:
4AKK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AKK entry

There are 2 chains in PDB entry 4AKK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 9ARG 391
B
 PRO 9TRP 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4AKK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
28 59Right-handed alpha
Helix 3
3
A
64 91Right-handed alpha
Helix 4
4
A
94 108Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
124 141Right-handed alpha
Helix 7
7
A
141 147Right-handed alpha
Helix 8
8
A
148 150Right-handed 310
Helix 9
9
A
152 186Right-handed alpha
Helix 10
10
A
189 214Right-handed alpha
Helix 11
11
A
215 226Right-handed alpha
Helix 12
12
A
229 241Right-handed alpha
Helix 13
13
A
249 286Right-handed alpha
Helix 14
14
A
303 313Right-handed alpha
Helix 15
15
A
313 332Right-handed alpha
Helix 16
16
A
332 354Right-handed alpha
Helix 17
17
A
357 373Right-handed alpha
Helix 18
18
A
375 386Right-handed alpha
Helix 19
19
A
387 390Right-handed 310
Helix 20
20
B
9 27Right-handed alpha
Helix 21
21
B
28 59Right-handed alpha
Helix 22
22
B
64 87Right-handed alpha
Helix 23
23
B
88 90Right-handed 310
Helix 24
24
B
94 108Right-handed alpha
Helix 25
25
B
110 121Right-handed alpha
Helix 26
26
B
124 141Right-handed alpha
Helix 27
27
B
141 148Right-handed alpha
Helix 28
28
B
152 186Right-handed alpha
Helix 29
29
B
189 214Right-handed alpha
Helix 30
30
B
215 226Right-handed alpha
Helix 31
31
B
229 242Right-handed alpha
Helix 32
32
B
249 285Right-handed alpha
Helix 33
33
B
303 313Right-handed alpha
Helix 34
34
B
313 331Right-handed alpha
Helix 35
35
B
332 354Right-handed alpha
Helix 36
36
B
357 373Right-handed alpha
Helix 37
37
B
375 386Right-handed alpha
Helix 38
38
B
387 390Right-handed 310
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There are no sheets in PDB entry 4AKK
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