Analysis of interatomic Contacts of Structural Units in PDB entry:
4AO6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AO6 entry

There is 1 chain in PDB entry 4AO6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 5LYS 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4AO6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 72Right-handed alpha
Helix 2
2
A
98 102Right-handed 310
Helix 3
3
A
104 112Right-handed alpha
Helix 4
4
A
113 134Right-handed alpha
Helix 5
5
A
144 157Right-handed alpha
Helix 6
6
A
174 182Right-handed alpha
Helix 7
7
A
183 185Right-handed 310
Helix 8
8
A
201 212Right-handed alpha
Helix 9
9
A
230 235Right-handed alpha
Helix 10
10
A
235 246Right-handed alpha
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There are 4 sheets in PDB entry 4AO6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
17 26anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
17 26anti-parallel
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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 222first strand
Strand 2
A
189 194parallel
Strand 3
A
160 166parallel
Strand 4
A
138 142parallel
Strand 5
A
45 50parallel
Strand 6
A
74 79parallel
Strand 7
A
29 38anti-parallel
Strand 8
A
17 26anti-parallel
Strand 9
A
12 14anti-parallel
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There are 9 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 222first strand
Strand 2
A
189 194parallel
Strand 3
A
160 166parallel
Strand 4
A
138 142parallel
Strand 5
A
45 50parallel
Strand 6
A
74 79parallel
Strand 7
A
29 38anti-parallel
Strand 8
A
17 26anti-parallel
Strand 9
A
6 7anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il