Analysis of interatomic Contacts of Structural Units in PDB entry:
4ARI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ARI entry

There are 2 chains in PDB entry 4ARI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0GLY 860
B
 G 1 C 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4ARI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 21Right-handed alpha
Helix 2
2
A
49 69Right-handed alpha
Helix 3
3
A
84 93Right-handed alpha
Helix 4
4
A
96 115Right-handed alpha
Helix 5
5
A
120 124Right-handed 310
Helix 6
6
A
129 146Right-handed alpha
Helix 7
7
A
195 197Right-handed 310
Helix 8
8
A
198 205Right-handed alpha
Helix 9
9
A
206 209Right-handed 310
Helix 10
10
A
213 225Right-handed alpha
Helix 11
11
A
249 256Right-handed 310
Helix 12
12
A
265 273Right-handed alpha
Helix 13
13
A
275 288Right-handed alpha
Helix 14
14
A
342 353Right-handed alpha
Helix 15
15
A
384 388Right-handed 310
Helix 16
16
A
391 406Right-handed alpha
Helix 17
17
A
446 450Right-handed 310
Helix 18
18
A
465 470Right-handed alpha
Helix 19
19
A
492 497Right-handed alpha
Helix 20
20
A
498 503Right-handed alpha
Helix 21
21
A
514 522Right-handed alpha
Helix 22
22
A
530 534Right-handed 310
Helix 23
23
A
536 551Right-handed alpha
Helix 24
24
A
587 591Right-handed 310
Helix 25
25
A
629 638Right-handed alpha
Helix 26
26
A
638 649Right-handed alpha
Helix 27
27
A
659 683Right-handed alpha
Helix 28
28
A
695 718Right-handed alpha
Helix 29
29
A
721 739Right-handed alpha
Helix 30
30
A
743 762Right-handed alpha
Helix 31
31
A
765 776Right-handed alpha
Helix 32
32
A
781 785Right-handed 310
Helix 33
33
A
791 796Right-handed alpha
Helix 34
34
A
821 831Right-handed alpha
Helix 35
35
A
832 837Right-handed alpha
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There are 11 sheets in PDB entry 4ARI. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
34 39parallel
Strand 3
A
524 528parallel
Strand 4
A
560 564parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
125 126parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 154first strand
Strand 2
A
188 193anti-parallel
Strand 3
A
420 421anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 247first strand
Strand 2
A
226 235anti-parallel
Strand 3
A
409 415anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 310first strand
Strand 2
A
317 323anti-parallel
Strand 3
A
258 261parallel
Strand 4
A
334 337anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
489 490anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 444first strand
Strand 2
A
434 437anti-parallel
Strand 3
A
481 485anti-parallel
Strand 4
A
475 478anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 586first strand
Strand 2
A
569 577anti-parallel
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There are 5 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 595first strand
Strand 2
A
601 605anti-parallel
Strand 3
A
611 619anti-parallel
Strand 4
A
569 577anti-parallel
Strand 5
A
583 586anti-parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 595first strand
Strand 2
A
601 605anti-parallel
Strand 3
A
611 619anti-parallel
Strand 4
A
569 577anti-parallel
Strand 5
A
656 657parallel
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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
809 817first strand
Strand 2
A
799 806anti-parallel
Strand 3
A
854 860parallel
Strand 4
A
843 850anti-parallel
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